RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SLC7A9P82251 487 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 ZCWPW2Q504Y3 356 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 NAIF1Q69YI7 327 aaPredicted RBP21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 PKN3Q6P5Z2 889 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 FUKQ8N0W3 1084 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 NUP93Q8N1F7 819 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 CRYBG2Q8N1P7 616 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 TTC16Q8NEE8 873 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 SLITRK1Q96PX8 696 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 KCNK16Q96T55 309 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 ATP8B3O60423 1300 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 LEFTY2O00292 366 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 TNFRSF10BO14763 440 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 RTN3O95197 1032 aaPredicted RBP21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 OAS1P00973 400 aaKnown RBP21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 YWHAQP27348 245 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 HOXC13P31276 330 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 MCCD1P59942 119 aaPredicted RBP21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 ENPEPQ07075 957 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 SPOPLQ6IQ16 392 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 INTS8Q75QN2 995 aaKnown RBP21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 ACOT1Q86TX2 421 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 LONP2Q86WA8 852 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 KIAA1958Q8N8K9 716 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 P2RY13Q9BPV8 354 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 DMAP1Q9NPF5 467 aaPredicted RBP21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 IL37Q9NZH6 218 aa21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 HELZP42694 1942 aaKnown RBP21.57■■□□□ 1.04
NCKIPSD-206ENST00000439518 HRO43593 1189 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 CLSTN1O94985 981 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 EGFP01133 1207 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 DRD1P21728 446 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 RPL13P26373 211 aaKnown RBP21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 PIK3CAP42336 1068 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 ASPAP45381 313 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 NDST1P52848 882 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 PPP3CAQ08209 521 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 UNC93AQ86WB7 457 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 FAM186BQ8IYM0 893 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 FMR1NBQ8N0W7 255 aaPredicted RBP21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 OVCA2Q8WZ82 227 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 SMARCD1Q96GM5 515 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 MED10Q9BTT4 135 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 HMGXB4Q9UGU5 601 aa21.56■■□□□ 1.04
NCKIPSD-206ENST00000439518 ABL1P00519 1130 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 TRIM49P0CI25 452 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 TRIM49CP0CI26 452 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 CNR2P34972 360 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 PSMC2P35998 433 aaKnown RBP21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 GCLMP48507 274 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 ADAM9Q13443 819 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 PDZD8Q8NEN9 1154 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 ZMIZ2Q8NF64 920 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 SCAMP5Q8TAC9 235 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 EZH1Q92800 747 aaPredicted RBP21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 SECISBP2LQ93073 1101 aaKnown RBP21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 EXOC4Q96A65 974 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 RMDN1Q96DB5 314 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 CPQQ9Y646 472 aa21.55■■□□□ 1.04
NCKIPSD-206ENST00000439518 FAM92AA1XBS5 289 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 ATG13O75143 517 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 RNF40O75150 1001 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 AP1G2O75843 785 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 NFATC1O95644 943 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 KRT13P13646 458 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 CCDC130P13994 396 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 TGM1P22735 817 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 SLC5A3P53794 718 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 INCA1Q0VD86 236 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 IFRD2Q12894 506 aaPredicted RBP21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 NR1H3Q13133 447 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 ORC1Q13415 861 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 EDRF1Q3B7T1 1238 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 FBXO43Q4G163 708 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 SNX30Q5VWJ9 437 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 HEATR6Q6AI08 1181 aaKnown RBP21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 GPR161Q8N6U8 529 aaKnown RBP21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 TAS1R2Q8TE23 839 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 CD101Q93033 1021 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 FBXO32Q969P5 355 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 CCDC34Q96HJ3 373 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 SMOQ99835 787 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 APOBEC3GQ9HC16 384 aaKnown RBP21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 CSNK1G1Q9HCP0 422 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 KRT82Q9NSB4 513 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 COMMD8Q9NX08 183 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 SMPD4Q9NXE4 827 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 RAB23Q9ULC3 237 aa21.54■■□□□ 1.04
NCKIPSD-206ENST00000439518 ATG2BQ96BY7 2078 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 SRSF5Q13243 272 aaKnown RBP21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 BECN1Q14457 450 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 LPAL2Q16609 132 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 GAB4Q2WGN9 574 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 LAIR1Q6GTX8 287 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 WDR5BQ86VZ2 330 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 SMYD4Q8IYR2 804 aaPredicted RBP21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 ADGRG2Q8IZP9 1017 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 C12orf29Q8N999 325 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 SLC2A14Q8TDB8 520 aa21.53■■□□□ 1.04
NCKIPSD-206ENST00000439518 CYP3A43Q9HB55 503 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms