RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 PLD3Q8IV08 490 aa11.58□□□□□ -0.56
SEMA4D-211ENST00000438547 ZNF786Q8N393 782 aa11.58□□□□□ -0.56
SEMA4D-211ENST00000438547 CCDC33Q8N5R6 958 aa11.58□□□□□ -0.56
SEMA4D-211ENST00000438547 BAP1Q92560 729 aa11.58□□□□□ -0.56
SEMA4D-211ENST00000438547 CHST7Q9NS84 486 aa11.58□□□□□ -0.56
SEMA4D-211ENST00000438547 RHBDL2Q9NX52 303 aa11.58□□□□□ -0.56
SEMA4D-211ENST00000438547 DPP3Q9NY33 737 aa11.58□□□□□ -0.56
SEMA4D-211ENST00000438547 DDTLA6NHG4 134 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 ARHGEF9O43307 516 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 PMPCBO75439 489 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 ANXA9O76027 345 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SUPT7LO94864 414 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 CBX6O95503 412 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 PSMC3P17980 439 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 GCNT1Q02742 428 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 KRT33BQ14525 404 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 ERMARDQ5T6L9 678 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 MFSD7Q6UXD7 560 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 OTOP1Q7RTM1 612 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 VGLL2Q8N8G2 317 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 RXFP2Q8WXD0 754 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 ZNF75CPQ92670 426 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 VCPIP1Q96JH7 1222 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 TEX12Q9BXU0 123 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 MYLK2Q9H1R3 596 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 RIC8BQ9NVN3 520 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 V9GYQ6 96 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 E9PBE3 544 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 DYNC1LI2O43237 492 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 KLHL41O60662 606 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 CLPTM1O96005 669 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 PCSK1P29120 753 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SLC12A3P55017 1021 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 DMC1Q14565 340 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 IYDQ6PHW0 289 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 KIAA2013Q8IYS2 634 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 AVENQ9NQS1 362 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 TEKT2Q9UIF3 430 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SLC30A1Q9Y6M5 507 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 ZSCAN9O15535 394 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SUPT20HL2P0C7V6 817 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 FAM200BP0CF97 657 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 HNRNPH3P31942 346 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 PTPN7P35236 360 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 DCAF4L1Q3SXM0 396 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 AGAP9Q5VTM2 703 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 TTC23LQ6PF05 361 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 EFL1Q7Z2Z2 1120 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 ACOT1Q86TX2 421 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 TMEM139Q8IV31 216 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SH3TC2Q8TF17 1288 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 STK32AQ8WU08 396 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SNRNP27Q8WVK2 155 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 APBB2Q92870 758 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 ELP3Q9H9T3 547 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 LATS2Q9NRM7 1088 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 REXO2Q9Y3B8 237 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SNX13Q9Y5W8 968 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 KIDINS220Q9ULH0 1771 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 VWDEQ8N2E2 1590 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 H2AFYO75367 372 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SNUPNO95149 360 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SHMT1P34896 483 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 MRPS15P82914 257 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 RAD51Q06609 339 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 VPS72Q15906 364 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 DEFB107AQ8IZN7 70 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SPATA20Q8TB22 786 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 CKAP2Q8WWK9 683 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 FAR2Q96K12 515 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 MMTAG2Q9BU76 263 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 KCTD10Q9H3F6 313 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 AGO4Q9HCK5 861 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 DDIT4Q9NX09 232 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 CD274Q9NZQ7 290 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 POLIQ9UNA4 740 aa11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 RUVBL2Q9Y230 463 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-211ENST00000438547 SHBGP04278 402 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 HIST1H2AGP0C0S8 130 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 HIST1H2ADP20671 130 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 PBX1P40424 430 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 GLRBP48167 497 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 PTPN11Q06124 597 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 CNGA2Q16280 664 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 MPZL3Q6UWV2 235 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 HIST1H2AHQ96KK5 128 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 HIST1H2AJQ99878 128 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 H2AFJQ9BTM1 129 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 DNPEPQ9ULA0 475 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 SOX13Q9UN79 622 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 MYO1GB0I1T2 1018 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 EML1O00423 815 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 NFIBO00712 420 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 NPTXRO95502 500 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 PSMA4P25789 261 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 TAF6P49848 677 aa11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 AUHQ13825 339 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 RRP1BQ14684 758 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-211ENST00000438547 PRAMEF18Q5VWM3 479 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms