RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 VAV3Q9UKW4 847 aa9.04□□□□□ -0.96
R3HDM1-208ENST00000438014 SOX13Q9UN79 622 aa9.04□□□□□ -0.96
R3HDM1-208ENST00000438014 GDAQ9Y2T3 454 aa9.04□□□□□ -0.96
R3HDM1-208ENST00000438014 ASB3Q9Y575 518 aa9.04□□□□□ -0.96
R3HDM1-208ENST00000438014 NUB1Q9Y5A7 615 aa9.04□□□□□ -0.96
R3HDM1-208ENST00000438014 COL4A2P08572 1712 aa9.04□□□□□ -0.96
R3HDM1-208ENST00000438014 DSPP15924 2871 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-208ENST00000438014 EGFP01133 1207 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 ARAFP10398 606 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 NME2P22392 152 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 IGFBP6P24592 240 aaPredicted RBP9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 MARCKSP29966 332 aaPredicted RBP9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 RPL9P32969 192 aaKnown RBP9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 GALK1P51570 392 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 RUNX3Q13761 415 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 CTTNQ14247 550 aaKnown RBP9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 DMC1Q14565 340 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 MAPK6Q16659 721 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 GPR158Q5T848 1215 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 NCAPH2Q6IBW4 605 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 VN1R5Q7Z5H4 357 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 TSTD1Q8NFU3 115 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 LRRC3Q9BY71 257 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 RNF26Q9BY78 433 aaPredicted RBP9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 LACRTQ9GZZ8 138 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 POLR3FQ9H1D9 316 aaPredicted RBP9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 CXCL16Q9H2A7 254 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 TASP1Q9H6P5 420 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 ZMYM5Q9UJ78 669 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 PCDHA4Q9UN74 947 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 CYP8B1Q9UNU6 501 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 INVSQ9Y283 1065 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 YIPF1Q9Y548 306 aa9.03□□□□□ -0.96
R3HDM1-208ENST00000438014 PCNX2A6NKB5 2137 aa9.02□□□□□ -0.96
R3HDM1-208ENST00000438014 ASH1LQ9NR48 2969 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 SMIM28A0A1B0GU29 152 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 ADARB2-AS1A8MUL3 147 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 ACKR2O00590 384 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 PODXLO00592 558 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 OPHN1O60890 802 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 SLITRK3O94933 977 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 LYPLA2O95372 231 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 BAG4O95429 457 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 F13A1P00488 732 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 HMGB1P09429 215 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 XRCC6P12956 609 aaKnown RBP eCLIP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 GCFC2P16383 781 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 ENGP17813 658 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 BMP6P22004 513 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 YARSP54577 528 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 LRRC14Q15048 493 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 GLRA4Q5JXX5 417 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 GALNT17Q6IS24 598 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 ADAMTSL4Q6UY14 1074 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 CCNI2Q6ZMN8 369 aaPredicted RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 BNC2Q6ZN30 1099 aaPredicted RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 LPCAT2Q7L5N7 544 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 DNAJB7Q7Z6W7 309 aaPredicted RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 ITIH5Q86UX2 942 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 TMC8Q8IU68 726 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 SYT12Q8IV01 421 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 SLITRK4Q8IW52 837 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 BLIDQ8IZY5 108 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 RPLP0P6Q8NHW5 317 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 TCEANC2Q96MN5 208 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 UBL7Q96S82 380 aaPredicted RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 NAP1L4Q99733 375 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 P2RY13Q9BPV8 354 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 FAM83CQ9BQN1 747 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 SLC26A6Q9BXS9 759 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 PIF1Q9H611 641 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 GOLGA2P5Q9HBQ8 144 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 KCNMB3Q9NPA1 279 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 TOPORSQ9NS56 1045 aaPredicted RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 POLR3BQ9NW08 1133 aaPredicted RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 FRRS1LQ9P0K9 344 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 KLF15Q9UIH9 416 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 TRIM33Q9UPN9 1127 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 TMA7Q9Y2S6 64 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 PCDHB5Q9Y5E4 795 aa9.02□□□□□ -0.97
R3HDM1-208ENST00000438014 SLC37A4O43826 429 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 GABRR2P28476 465 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 KRT32Q14532 448 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 SEZ6Q53EL9 994 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 SPDYCQ5MJ68 293 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 STXBP5Q5T5C0 1151 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 LMBRD2Q68DH5 695 aaPredicted RBP9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 CDCA2Q69YH5 1023 aaPredicted RBP9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 CC2D1AQ6P1N0 951 aaPredicted RBP9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 SLC23A3Q6PIS1 610 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 GAREM2Q75VX8 874 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 SULF2Q8IWU5 870 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 SLFN12Q8IYM2 578 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 MCPH1Q8NEM0 835 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 BEST2Q8NFU1 509 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 CEP76Q8TAP6 659 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 GATAD2BQ8WXI9 593 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 ADAMTS14Q8WXS8 1223 aa9.01□□□□□ -0.97
R3HDM1-208ENST00000438014 GCNAQ96QF7 691 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms