RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 OPRD1P41143 372 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 SYKP43405 635 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 KRT85P78386 507 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 PPP3CAQ08209 521 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 TAF10Q12962 218 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 KCNB1Q14721 858 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 DGKKQ5KSL6 1271 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 SV2AQ7L0J3 742 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 ACOT1Q86TX2 421 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 C12orf40Q86WS4 652 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 SYAP1Q96A49 352 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-202ENST00000430200 EEF2KMTQ96G04 330 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 FAM126AQ9BYI3 521 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-202ENST00000430200 ELOVL4Q9GZR5 314 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 THG1LQ9NWX6 298 aaKnown RBP12.54□□□□□ -0.4
HDAC4-202ENST00000430200 DUS2Q9NX74 493 aaKnown RBP12.54□□□□□ -0.4
HDAC4-202ENST00000430200 DLL3Q9NYJ7 618 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 CGNQ9P2M7 1197 aaKnown RBP12.54□□□□□ -0.4
HDAC4-202ENST00000430200 ZMYM5Q9UJ78 669 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 CPQQ9Y646 472 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 ADAMTS9Q9P2N4 1935 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 CHD8Q9HCK8 2581 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 SPEGQ15772 3267 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 KMT2BQ9UMN6 2715 aaPredicted RBP12.53□□□□□ -0.4
HDAC4-202ENST00000430200 PDXKO00764 312 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 TRIM66O15016 1216 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 ASS1P00966 412 aaKnown RBP12.53□□□□□ -0.4
HDAC4-202ENST00000430200 HLA-DRAP01903 254 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 HDCP19113 662 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 ATICP31939 592 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 GALK1P51570 392 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 SLC5A3P53794 718 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 SPEM2Q0P670 501 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 TRPC3Q13507 836 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 PDGFRLQ15198 375 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 MAPRE1Q15691 268 aaKnown RBP12.53□□□□□ -0.4
HDAC4-202ENST00000430200 ZNF667Q5HYK9 610 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 CEP135Q66GS9 1140 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 PRR23BQ6ZRT6 265 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 FILIP1Q7Z7B0 1213 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 C12orf29Q8N999 325 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 TAS1R2Q8TE23 839 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 ERCC4Q92889 916 aaPredicted RBP12.53□□□□□ -0.4
HDAC4-202ENST00000430200 HHIPQ96QV1 700 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 SMOQ99835 787 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 CCSER2Q9H7U1 834 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 FAM49BQ9NUQ9 324 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 TRAF3IP3Q9Y228 551 aa12.53□□□□□ -0.4
HDAC4-202ENST00000430200 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
HDAC4-202ENST00000430200 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
HDAC4-202ENST00000430200 COCHO43405 550 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 PHACTR2O75167 634 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 PDIA4P13667 645 aaKnown RBP12.52□□□□□ -0.41
HDAC4-202ENST00000430200 HNRNPLP14866 589 aaKnown RBP eCLIP12.52□□□□□ -0.415e-8■■■■■ 27.1
HDAC4-202ENST00000430200 NR2F2P24468 414 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 ANXA13P27216 316 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 PIK3CAP42336 1068 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 GCLMP48507 274 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 IFNAR2P48551 515 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 NDST1P52848 882 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 SLC7A9P82251 487 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 RSPO4Q2I0M5 234 aaPredicted RBP12.52□□□□□ -0.41
HDAC4-202ENST00000430200 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 LONP2Q86WA8 852 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 CPA6Q8N4T0 437 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
HDAC4-202ENST00000430200 RPLP0P6Q8NHW5 317 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 GOLGA5Q8TBA6 731 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 SLC2A14Q8TDB8 520 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 TMC2Q8TDI7 906 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 WHAMMQ8TF30 809 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 P2RY13Q9BPV8 354 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 ZDHHC4Q9NPG8 344 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 OSER1Q9NX31 292 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 TRPM5Q9NZQ8 1165 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 GMIPQ9P107 970 aa12.52□□□□□ -0.41
HDAC4-202ENST00000430200 A0A1W2PQ27 194 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 A0A1W2PQ64 194 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 A0A1W2PQD8 194 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 ZDHHC11BP0C7U3 371 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 INCA1Q0VD86 236 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 PSMD2Q13200 908 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 PNOCQ13519 176 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 SIM2Q14190 667 aaPredicted RBP12.51□□□□□ -0.41
HDAC4-202ENST00000430200 CCDC6Q16204 474 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 LAIR1Q6GTX8 287 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 CC2D1AQ6P1N0 951 aaPredicted RBP12.51□□□□□ -0.41
HDAC4-202ENST00000430200 PHTF2Q8N3S3 785 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 SYNPOQ8N3V7 929 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 SEMA4DQ92854 862 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 ATP2A3Q93084 1043 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 CEP295NLQ96MC4 621 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 ARID3AQ99856 593 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
HDAC4-202ENST00000430200 DMAP1Q9NPF5 467 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms