RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 METTL14Q9HCE5 456 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 SAMSN1Q9NSI8 373 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 C2orf42Q9NWW7 574 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 HMGXB4Q9UGU5 601 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 NFE2L3Q9Y4A8 694 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 CEP250Q9BV73 2442 aa18.02■□□□□ 0.48
UBE3D-204ENST00000430071 A8MXQ7 604 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 LAMTOR5O43504 91 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 ARSAP15289 507 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 ATICP31939 592 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 CTHP32929 405 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 AP3M2P53677 418 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 ZXDBP98169 803 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 MYL5Q02045 173 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 PON2Q15165 354 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 ZACNQ401N2 412 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 HSP90AA4PQ58FG1 418 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 DCAF17Q5H9S7 520 aaPredicted RBP18.02■□□□□ 0.47
UBE3D-204ENST00000430071 TCERG1LQ5VWI1 586 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 NAIF1Q69YI7 327 aaPredicted RBP18.02■□□□□ 0.47
UBE3D-204ENST00000430071 PAQR9Q6ZVX9 377 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 TTC16Q8NEE8 873 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 FAM83CQ9BQN1 747 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 CHRDQ9H2X0 955 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 MMRN2Q9H8L6 949 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 VRTNQ9H8Y1 702 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 TDP1Q9NUW8 608 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 GCNT4Q9P109 453 aa18.02■□□□□ 0.47
UBE3D-204ENST00000430071 MRPS17Q9Y2R5 130 aaKnown RBP18.02■□□□□ 0.47
UBE3D-204ENST00000430071 HLA-DRAP01903 254 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 AVPR1AP37288 418 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 NCAPHQ15003 741 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 ZNF667Q5HYK9 610 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 VSTM1Q6UX27 236 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 Q6ZS52 159 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 AOPEPQ8N6M6 819 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 B3GALNT2Q8NCR0 500 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 SPATA17Q96L03 361 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 EBF3Q9H4W6 596 aa18.01■□□□□ 0.47
UBE3D-204ENST00000430071 UXTQ9UBK9 157 aaPredicted RBP18.01■□□□□ 0.47
UBE3D-204ENST00000430071 NCAM2O15394 837 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 CLSTN1O94985 981 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 FAM163BP0C2L3 166 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 DDX6P26196 483 aaKnown RBP eCLIP18■□□□□ 0.47
UBE3D-204ENST00000430071 GTF2H1P32780 548 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 ZNF165P49910 485 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 CBWD6Q4V339 395 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 CBWD3Q5JTY5 395 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 CBWD5Q5RIA9 395 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 CDKAL1Q5VV42 579 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 KCNK16Q96T55 309 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 BPIFA3Q9BQP9 254 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 NAT10Q9H0A0 1025 aaKnown RBP18■□□□□ 0.47
UBE3D-204ENST00000430071 APOBEC3GQ9HC16 384 aaKnown RBP18■□□□□ 0.47
UBE3D-204ENST00000430071 TMEM8AQ9HCN3 771 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 FANCLQ9NW38 375 aa18■□□□□ 0.47
UBE3D-204ENST00000430071 TDGF1P13385 188 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 IFRD2Q12894 506 aaPredicted RBP17.99■□□□□ 0.47
UBE3D-204ENST00000430071 MAPRE1Q15691 268 aaKnown RBP17.99■□□□□ 0.47
UBE3D-204ENST00000430071 ZNF77Q15935 545 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 ITPRIPL2Q3MIP1 535 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 DENND5BQ6ZUT9 1274 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 ACOT1Q86TX2 421 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 DHX40Q8IX18 779 aaKnown RBP17.99■□□□□ 0.47
UBE3D-204ENST00000430071 TAS1R2Q8TE23 839 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 C8orf48Q96LL4 319 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 TTLL2Q9BWV7 592 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 RNF38Q9H0F5 515 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 HSD3B7Q9H2F3 369 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 C8orf33Q9H7E9 229 aaPredicted RBP17.99■□□□□ 0.47
UBE3D-204ENST00000430071 FBRSL1Q9HCM7 1045 aaKnown RBP17.99■□□□□ 0.47
UBE3D-204ENST00000430071 PRMT8Q9NR22 394 aaPredicted RBP17.99■□□□□ 0.47
UBE3D-204ENST00000430071 FBXO4Q9UKT5 387 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 DCHS1Q96JQ0 3298 aa17.99■□□□□ 0.47
UBE3D-204ENST00000430071 STX10O60499 249 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 BEST1O76090 585 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 ASS1P00966 412 aaKnown RBP17.98■□□□□ 0.47
UBE3D-204ENST00000430071 CCDC130P13994 396 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 MAGEA9P43362 315 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 ASPAP45381 313 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 MXI1P50539 228 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 MLLT6P55198 1093 aaPredicted RBP17.98■□□□□ 0.47
UBE3D-204ENST00000430071 SATB1Q01826 763 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 RUNX3Q13761 415 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 IQCB1Q15051 598 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 KRT39Q6A163 491 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 PKN3Q6P5Z2 889 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 FAM35AQ86V20 835 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 RALGPS2Q86X27 583 aaPredicted RBP17.98■□□□□ 0.47
UBE3D-204ENST00000430071 CREBRFQ8IUR6 639 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 FAM114A1Q8IWE2 563 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 SCAMP5Q8TAC9 235 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 TWNKQ96RR1 684 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 LINC00597Q9H2U6 94 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.98■□□□□ 0.47
UBE3D-204ENST00000430071 WNT6Q9Y6F9 365 aa17.98■□□□□ 0.47
UBE3D-204ENST00000430071 TRAV19A0A0A6YYK7 116 aa17.97■□□□□ 0.47
UBE3D-204ENST00000430071 KCNJ18B7U540 433 aa17.97■□□□□ 0.47
UBE3D-204ENST00000430071 SCAMP3O14828 347 aaKnown RBP17.97■□□□□ 0.47
UBE3D-204ENST00000430071 CKMP06732 381 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms