RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 GALNT4Q8N4A0 578 aa13.13□□□□□ -0.31
CPNE4-201ENST00000429747 BEST2Q8NFU1 509 aa13.13□□□□□ -0.31
CPNE4-201ENST00000429747 FAM172AQ8WUF8 416 aa13.13□□□□□ -0.31
CPNE4-201ENST00000429747 BSNDQ8WZ55 320 aa13.13□□□□□ -0.31
CPNE4-201ENST00000429747 CNPY3Q9BT09 278 aa13.13□□□□□ -0.31
CPNE4-201ENST00000429747 GOLGA8QA0A0J9YX86 632 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 GOLGA8OA6NCC3 632 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 GOLGA8NF8WBI6 632 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 FASTKD1Q53R41 847 aaKnown RBP13.12□□□□□ -0.31
CPNE4-201ENST00000429747 EFHC2Q5JST6 749 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 RARS2Q5T160 578 aaKnown RBP13.12□□□□□ -0.31
CPNE4-201ENST00000429747 DENND1BQ6P3S1 775 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
CPNE4-201ENST00000429747 MTFR1LQ9H019 292 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 TAGLN3Q9UI15 199 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 STAP1Q9ULZ2 295 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 HUS1O60921 280 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 CCNE2O96020 404 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 RANBP1P43487 201 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 ESRRGP62508 458 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 DPYSL3Q14195 570 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 AMHR2Q16671 573 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 TMPRSS6Q8IU80 811 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 ASAP3Q8TDY4 903 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
CPNE4-201ENST00000429747 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 KCNK16Q96T55 309 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 FRMD8P1Q9BZ68 369 aaPredicted RBP13.12□□□□□ -0.31
CPNE4-201ENST00000429747 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
CPNE4-201ENST00000429747 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 MROH7Q68CQ1 1323 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 ZMYM2Q9UBW7 1377 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 ALOX15BO15296 676 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 KDELR1P24390 212 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 KDELC2Q7Z4H8 507 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 SAMD3Q8N6K7 520 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 LRRN4Q8WUT4 740 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 ANKRD27Q96NW4 1050 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
CPNE4-201ENST00000429747 FRMD8Q9BZ67 464 aaPredicted RBP13.12□□□□□ -0.31
CPNE4-201ENST00000429747 COL20A1Q9P218 1284 aa13.12□□□□□ -0.31
CPNE4-201ENST00000429747 PABPN1LA6NDY0 278 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 VWA5AO00534 786 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 ATP6V1B1P15313 513 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 SKIV2L2P42285 1042 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 SATB1Q01826 763 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 CYP1B1Q16678 543 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 ARL13BQ3SXY8 428 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 ACOT1Q86TX2 421 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 XAB2Q9HCS7 855 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 DRG1Q9Y295 367 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 FNDC3AQ9Y2H6 1198 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 ALADP13716 330 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 BACE1P56817 501 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 MRPS9P82933 396 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 BTKQ06187 659 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 TRIM67Q6ZTA4 783 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 VSIG10LQ86VR7 867 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 PHF13Q86YI8 300 aaPredicted RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 BRSK2Q8IWQ3 736 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 ZC3H3Q8IXZ2 948 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 UPF3AQ9H1J1 476 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 M0QZ92 97 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 SLC4A1P02730 911 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 KCNA4P22459 653 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 ADSSP30520 456 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 SULT1E1P49888 294 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 WDR4P57081 412 aaKnown RBP13.11□□□□□ -0.31
CPNE4-201ENST00000429747 TMEM62Q0P6H9 643 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 TTC39CQ8N584 583 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 PDZD8Q8NEN9 1154 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 MRIQ9BWK5 157 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 SIK2Q9H0K1 926 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 TASP1Q9H6P5 420 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
CPNE4-201ENST00000429747 C2orf71A6NGG8 1288 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 IL18RAPO95256 599 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 PSMG1O95456 288 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 APOC2P02655 101 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 TRMT5Q32P41 509 aaKnown RBP13.1□□□□□ -0.31
CPNE4-201ENST00000429747 NBPF12Q5TAG4 269 aaPredicted RBP13.1□□□□□ -0.31
CPNE4-201ENST00000429747 C16orf46Q6P387 395 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 MPZL3Q6UWV2 235 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 LRMDAQ9H2I8 198 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 UMODL1Q5DID0 1318 aa13.1□□□□□ -0.31
CPNE4-201ENST00000429747 NWD2Q9ULI1 1742 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms