RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 FBXO44Q9H4M3 255 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 LRRC4Q9HBW1 653 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 CYTH4Q9UIA0 394 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 XIRP2A4UGR9 3374 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
COL11A1-204ENST00000427239 XYLBO75191 536 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 RTN2O75298 545 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 POU2F2P09086 479 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 KIF11P52732 1056 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 COL19A1Q14993 1142 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 ALKBH5Q6P6C2 394 aaKnown RBP16.25■□□□□ 0.19
COL11A1-204ENST00000427239 PHF13Q86YI8 300 aaPredicted RBP16.25■□□□□ 0.19
COL11A1-204ENST00000427239 TMEM139Q8IV31 216 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 CMASQ8NFW8 434 aaPredicted RBP16.25■□□□□ 0.19
COL11A1-204ENST00000427239 VN1R2Q8NFZ6 395 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 MYLIPQ8WY64 445 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 PSMG2Q969U7 264 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 ISCUQ9H1K1 167 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 IL37Q9NZH6 218 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 NAGPAQ9UK23 515 aa16.25■□□□□ 0.19
COL11A1-204ENST00000427239 EYSQ5T1H1 3165 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 CCDC195A0A1B0GUA6 201 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 MMP8P22894 467 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 GABRB2P47870 512 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 GPR15P49685 360 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 SLC5A3P53794 718 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 GFPT1Q06210 699 aaPredicted RBP16.24■□□□□ 0.19
COL11A1-204ENST00000427239 C10orf76Q5T2E6 689 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 DNAJB7Q7Z6W7 309 aaPredicted RBP16.24■□□□□ 0.19
COL11A1-204ENST00000427239 GPR152Q8TDT2 470 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 IPO4Q8TEX9 1081 aaKnown RBP16.24■□□□□ 0.19
COL11A1-204ENST00000427239 GIPC2Q8TF65 315 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 C18orf8Q96DM3 657 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 MYRFLQ96LU7 910 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 CPXM1Q96SM3 734 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 PRKD2Q9BZL6 878 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 SYNCQ9H7C4 482 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 SFXN1Q9H9B4 322 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 EPN1Q9Y6I3 576 aaPredicted RBP16.24■□□□□ 0.19
COL11A1-204ENST00000427239 USP3Q9Y6I4 520 aa16.24■□□□□ 0.19
COL11A1-204ENST00000427239 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 RFPL2O75678 378 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 FBXO21O94952 628 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 IPO7O95373 1038 aaKnown RBP16.23■□□□□ 0.19
COL11A1-204ENST00000427239 GLP2RO95838 553 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 FTLP02792 175 aaPredicted RBP16.23■□□□□ 0.19
COL11A1-204ENST00000427239 FOSL2P15408 326 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 RGS7P49802 495 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 TKTL1P51854 596 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 RBM10P98175 930 aaKnown RBP16.23■□□□□ 0.19
COL11A1-204ENST00000427239 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
COL11A1-204ENST00000427239 CCDC122Q5T0U0 273 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 SDHAF4Q5VUM1 108 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 ZDHHC17Q8IUH5 632 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 SIX6OS1Q8N1H7 587 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 SCML4Q8N228 414 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 UBE2Q2Q8WVN8 375 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 PABPC5Q96DU9 382 aaKnown RBP16.23■□□□□ 0.19
COL11A1-204ENST00000427239 TRMT2BQ96GJ1 504 aaKnown RBP16.23■□□□□ 0.19
COL11A1-204ENST00000427239 TTLL2Q9BWV7 592 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 CNGB3Q9NQW8 809 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 ADAM22Q9P0K1 906 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 UXTQ9UBK9 157 aaPredicted RBP16.23■□□□□ 0.19
COL11A1-204ENST00000427239 STRIP2Q9ULQ0 834 aa16.23■□□□□ 0.19
COL11A1-204ENST00000427239 FAM92AA1XBS5 289 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 SOWAHDA6NJG2 315 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 EIF3CLB5ME19 914 aaKnown RBP16.22■□□□□ 0.19
COL11A1-204ENST00000427239 ARHGAP6O43182 974 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 NDUFA10O95299 355 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 LCA5LO95447 670 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 ZBED1O96006 694 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 CALB1P05937 261 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 PTPN2P17706 415 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 YWHAQP27348 245 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 SPA17Q15506 151 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 PM20D1Q6GTS8 502 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 ANKRD54Q6NXT1 300 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 SCUBE3Q8IX30 993 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 MICALL1Q8N3F8 863 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 SCAMP5Q8TAC9 235 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 EIF3CQ99613 913 aaKnown RBP16.22■□□□□ 0.19
COL11A1-204ENST00000427239 LUC7LQ9NQ29 371 aaKnown RBP16.22■□□□□ 0.19
COL11A1-204ENST00000427239 PTPRDP23468 1912 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 MTCL1Q9Y4B5 1905 aaKnown RBP16.22■□□□□ 0.19
COL11A1-204ENST00000427239 TMCO5BA8MYB1 307 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 E5RJQ4 531 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 CCL16O15467 120 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 LINC01565O15544 149 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 SART1O43290 800 aaKnown RBP16.22■□□□□ 0.19
COL11A1-204ENST00000427239 LCP1P13796 627 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 HMGA1P17096 107 aaKnown RBP16.22■□□□□ 0.19
COL11A1-204ENST00000427239 PPP3CCP48454 512 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 ITIH3Q06033 890 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 ZNF268Q14587 947 aaPredicted RBP16.22■□□□□ 0.19
COL11A1-204ENST00000427239 PTPN20Q4JDL3 420 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 PABPC1LQ4VXU2 614 aaKnown RBP16.22■□□□□ 0.19
COL11A1-204ENST00000427239 GPRIN1Q7Z2K8 1008 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 MCOLN2Q8IZK6 566 aa16.22■□□□□ 0.19
COL11A1-204ENST00000427239 LEMD2Q8NC56 503 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms