RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ANKRD7Q92527 254 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 ASB2Q96Q27 587 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 LNPEPQ9UIQ6 1025 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 MGAT4DA6NG13 374 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 CRTAMO95727 393 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 F9P00740 461 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 CHRM3P20309 590 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 FASP25445 335 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 KPNA1P52294 538 aaPredicted RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 PIH1D3Q9NQM4 214 aaKnown RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 DBR1Q9UK59 544 aaKnown RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 PIN4Q9Y237 131 aaKnown RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 SNUPNO95149 360 aaKnown RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 WDR93Q6P2C0 686 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 CASP12Q6UXS9 341 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 OTOAQ7RTW8 1153 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 MYO1HQ8N1T3 1032 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 ADI1Q9BV57 179 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 TMEM117Q9H0C3 514 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 TSR3Q9UJK0 312 aaKnown RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 LRCH1Q9Y2L9 728 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 EZH2Q15910 746 aaKnown RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 NEK5Q6P3R8 708 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 RNF149Q8NC42 400 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 RABGEF1Q9UJ41 708 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 CPDO75976 1380 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 PRLRP16471 622 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 ZNF24P17028 368 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 ZNF512Q96ME7 567 aaPredicted RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 MAP3K14Q99558 947 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 UGT2B28Q9BY64 529 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 TRPM5Q9NZQ8 1165 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 YWHAZP63104 245 aaKnown RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 CYP4A22Q5TCH4 519 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ARID3BQ8IVW6 561 aaPredicted RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 AHI1Q8N157 1196 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 FEZF2Q8TBJ5 459 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 UCMAQ8WVF2 138 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ANKRD6Q9Y2G4 727 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ZBTB1Q9Y2K1 713 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 RAD17O75943 681 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ATP6V1C1P21283 382 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 GTF2E2P29084 291 aaKnown RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 MAPK7Q13164 816 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ARID5BQ14865 1188 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 WASHC2DQ5SRD0 308 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 MZT2BQ6NZ67 158 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 GNA13Q14344 377 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 KCTD14Q9BQ13 255 aaPredicted RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ZNF518BQ9C0D4 1074 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ZC3H11AO75152 810 aaKnown RBP eCLIP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 BCAP31P51572 246 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 DCTN2Q13561 401 aaKnown RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 RBM12Q9NTZ6 932 aaKnown RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 PHTF1Q9UMS5 762 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 MPOP05164 745 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 CAPN1P07384 714 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 FAM200BP0CF97 657 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 DPYDQ12882 1025 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 R3HDM1Q15032 1099 aaKnown RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 AAASQ9NRG9 546 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 DYRK1BQ9Y463 629 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 TARSP26639 723 aaKnown RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 COILP38432 576 aaPredicted RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ALDH1A3P47895 512 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 IPMKQ8NFU5 416 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ADGRE3Q9BY15 652 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 IL1RL2Q9HB29 575 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 KIF28PB7ZC32 967 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 GPSM2P81274 684 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 NOTUMQ6P988 496 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 ZNF669Q96BR6 464 aaPredicted RBP14.91□□□□□ -0.02
PTPN13-203ENST00000427191 UGGT1Q9NYU2 1555 aa14.91□□□□□ -0.02
PTPN13-203ENST00000427191 PRRG1O14668 218 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 RAD51CO43502 376 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 EGFRP00533 1210 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 ODC1P11926 461 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 SLC11A2P49281 568 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 DENND6AQ8IWF6 608 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 ADSSL1Q8N142 457 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 KYQ8NBH2 561 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 RORBQ92753 470 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 DLG3Q92796 817 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 AIFM3Q96NN9 605 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 WRNIP1Q96S55 665 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 DCP1AQ9NPI6 582 aaPredicted RBP14.9□□□□□ -0.02
PTPN13-203ENST00000427191 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 VPS51Q9UID3 782 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 GMEB1Q9Y692 573 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 CAMSAP1Q5T5Y3 1602 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 CCDC189A1A4V9 331 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 PAICSP22234 425 aaKnown RBP14.9□□□□□ -0.02
PTPN13-203ENST00000427191 GPC1P35052 558 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 LPCAT2Q7L5N7 544 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 ANKS1AQ92625 1134 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 TRIM51Q9BSJ1 452 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 C9orf16Q9BUW7 83 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 TMCO1Q9UM00 188 aa14.9□□□□□ -0.02
PTPN13-203ENST00000427191 OASLQ15646 514 aaKnown RBP14.9□□□□□ -0.02
PTPN13-203ENST00000427191 ATP8B4Q8TF62 1192 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms