RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 KPNA1P52294 538 aaPredicted RBP13.52□□□□□ -0.25
GPC1-204ENST00000426280 MAP3K7CLP57077 242 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 LRMPQ12912 555 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 PON2Q15165 354 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 DCAF17Q5H9S7 520 aaPredicted RBP13.52□□□□□ -0.25
GPC1-204ENST00000426280 CLEC20AQ6ZU45 233 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 FILIP1Q7Z7B0 1213 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 SLC4A11Q8NBS3 891 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 FBXL13Q8NEE6 735 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 CSGALNACT1Q8TDX6 532 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 SH3RF2Q8TEC5 729 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 TNIP3Q96KP6 325 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 NELL2Q99435 816 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 TSG101Q99816 390 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 NIF3L1Q9GZT8 377 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 CSNK1G1Q9HCP0 422 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 POLR3BQ9NW08 1133 aaPredicted RBP13.52□□□□□ -0.25
GPC1-204ENST00000426280 SPATA6Q9NWH7 488 aaPredicted RBP13.52□□□□□ -0.25
GPC1-204ENST00000426280 COQ4Q9Y3A0 265 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 TRAV19A0A0A6YYK7 116 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 OLFM2O95897 454 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 OAS1P00973 400 aaKnown RBP13.51□□□□□ -0.25
GPC1-204ENST00000426280 CKMP06732 381 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 USP17L7P0C7H9 530 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 SLC5A3P53794 718 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 RAD23BP54727 409 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 LRRC63Q05C16 580 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 USP4Q13107 963 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 RUNX3Q13761 415 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 ZNF268Q14587 947 aaPredicted RBP13.51□□□□□ -0.25
GPC1-204ENST00000426280 MTF1Q14872 753 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 PPP1R26Q5T8A7 1209 aaPredicted RBP13.51□□□□□ -0.25
GPC1-204ENST00000426280 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 PKN3Q6P5Z2 889 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 Q6ZS52 159 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 UBR7Q8N806 425 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 EZH1Q92800 747 aaPredicted RBP13.51□□□□□ -0.25
GPC1-204ENST00000426280 KAT5Q92993 513 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 HNRNPABQ99729 332 aaKnown RBP13.51□□□□□ -0.25
GPC1-204ENST00000426280 CCSER2Q9H7U1 834 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 CYP3A43Q9HB55 503 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 OSER1Q9NX31 292 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 SMPD4Q9NXE4 827 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 TRPM5Q9NZQ8 1165 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 GMIPQ9P107 970 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 TMEM63CQ9P1W3 806 aa13.51□□□□□ -0.25
GPC1-204ENST00000426280 ARMCX3Q9UH62 379 aaPredicted RBP13.51□□□□□ -0.25
GPC1-204ENST00000426280 FAM92AA1XBS5 289 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 SOBPA7XYQ1 873 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 PROB1E7EW31 1015 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 LEFTY2O00292 366 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 MAN2B1O00754 1011 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 SLC16A3O15427 465 aaKnown RBP13.5□□□□□ -0.25
GPC1-204ENST00000426280 ZDHHC11BP0C7U3 371 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 P4HA1P13674 534 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 YWHAQP27348 245 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 RPS9P46781 194 aaKnown RBP13.5□□□□□ -0.25
GPC1-204ENST00000426280 GALK1P51570 392 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 MLLT6P55198 1093 aaPredicted RBP13.5□□□□□ -0.25
GPC1-204ENST00000426280 GAB4Q2WGN9 574 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 EML3Q32P44 896 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 ITPRIPL2Q3MIP1 535 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 FSTL4Q6MZW2 842 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 SMARCD1Q96GM5 515 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 ZFRQ96KR1 1074 aaKnown RBP13.5□□□□□ -0.25
GPC1-204ENST00000426280 CEP295NLQ96MC4 621 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 NT5C1AQ9BXI3 368 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 CHRDQ9H2X0 955 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 C8orf33Q9H7E9 229 aaPredicted RBP13.5□□□□□ -0.25
GPC1-204ENST00000426280 NMUR1Q9HB89 426 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 DMAP1Q9NPF5 467 aaPredicted RBP13.5□□□□□ -0.25
GPC1-204ENST00000426280 CISHQ9NSE2 258 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 ARHGAP26Q9UNA1 814 aa13.5□□□□□ -0.25
GPC1-204ENST00000426280 MIA3Q5JRA6 1907 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 PATJQ8NI35 1801 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 RNF225M0QZC1 329 aaPredicted RBP13.49□□□□□ -0.25
GPC1-204ENST00000426280 TULP2O00295 520 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 PSMA7O14818 248 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 COCHO43405 550 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 TBX18O95935 607 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 TDGF1P13385 188 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 FMO5P49326 533 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 SLC7A9P82251 487 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 SATB1Q01826 763 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 CSTF1Q05048 431 aaKnown RBP13.49□□□□□ -0.25
GPC1-204ENST00000426280 DMWDQ09019 674 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 MESP2Q0VG99 397 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 CAVIN1Q6NZI2 390 aaKnown RBP13.49□□□□□ -0.25
GPC1-204ENST00000426280 RALGPS2Q86X27 583 aaPredicted RBP13.49□□□□□ -0.25
GPC1-204ENST00000426280 IRF2BP1Q8IU81 584 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 TRIML1Q8N9V2 468 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 OSCP1Q8WVF1 389 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 FBXO32Q969P5 355 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 HEXIM2Q96MH2 286 aaKnown RBP13.49□□□□□ -0.25
GPC1-204ENST00000426280 ZSWIM1Q9BR11 485 aa13.49□□□□□ -0.25
GPC1-204ENST00000426280 SRRTQ9BXP5 876 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms