RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 LHX5Q9H2C1 402 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 NOP2P46087 812 aaKnown RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 VAV2P52735 878 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 SLC5A3P53794 718 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 DMAP1Q9NPF5 467 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 METTL5Q9NRN9 209 aaKnown RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 A0A0C4DFX4 3053 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 PAX3P23760 479 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 NRIP1P48552 1158 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 DNA2P51530 1060 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 SMC1AQ14683 1233 aaKnown RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 GRIN2CQ14957 1233 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 NFE2Q16621 373 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 XYLT1Q86Y38 959 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 MICALL1Q8N3F8 863 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 C12orf76Q8N812 135 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 C18orf8Q96DM3 657 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 NRG2O14511 850 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 FAM163BP0C2L3 166 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 ATF2P15336 505 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 CDH5P33151 784 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 CFAP221Q4G0U5 840 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 FAM102AQ5T9C2 384 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 Q7L0L9 218 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 SLC35G2Q8TBE7 412 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 CTNNBL1Q8WYA6 563 aaPredicted RBP14.16□□□□□ -0.14
PRPF39-202ENST00000424478 MCEEQ96PE7 176 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 LRRC4Q9HBW1 653 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 CTTNBP2NLQ9P2B4 639 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 RWDD3Q9Y3V2 267 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 CAPN6Q9Y6Q1 641 aa14.16□□□□□ -0.14
PRPF39-202ENST00000424478 ZNF638Q14966 1978 aaKnown RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 XPO1O14980 1071 aaKnown RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 ABLIM3O94929 683 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 LSM8O95777 96 aaKnown RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 GZMAP12544 262 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 TNNT1P13805 278 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 TFE3P19532 575 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 KRT83P78385 493 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 TWF1Q12792 350 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 RAB33AQ14088 237 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 MAPRE1Q15691 268 aaKnown RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 TRNP1Q6NT89 227 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 EDEM1Q92611 657 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 C16orf45Q96MC5 204 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 NUP85Q9BW27 656 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 YJEFN3A6XGL0 299 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 E7ENQ6 273 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 RB1P06400 928 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 HAPLN1P10915 354 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 PLA2G4AP47712 749 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 PITX1P78337 314 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 ARHGAP29Q52LW3 1261 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 SH3PXD2AQ5TCZ1 1133 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 TRIM72Q6ZMU5 477 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 PHF13Q86YI8 300 aaPredicted RBP14.15□□□□□ -0.14
PRPF39-202ENST00000424478 FAM149B1Q96BN6 582 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 YIPF1Q9Y548 306 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 TRIOO75962 3097 aa14.15□□□□□ -0.14
PRPF39-202ENST00000424478 MYO16Q9Y6X6 1858 aa14.15□□□□□ -0.15
PRPF39-202ENST00000424478 ANKRD62A6NC57 917 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 LINC01565O15544 149 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 EP400NLQ6ZTU2 488 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 SIX6OS1Q8N1H7 587 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 ST13P5Q8NFI4 369 aaPredicted RBP14.14□□□□□ -0.15
PRPF39-202ENST00000424478 ADAM32Q8TC27 787 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 SPATA18Q8TC71 538 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 SLC4A5Q9BY07 1137 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 FAM124BQ9H5Z6 455 aaPredicted RBP14.14□□□□□ -0.15
PRPF39-202ENST00000424478 RXFP1Q9HBX9 757 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 CSNK1G1Q9HCP0 422 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 HCFC1R1Q9NWW0 138 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 AFF4Q9UHB7 1163 aaKnown RBP14.14□□□□□ -0.15
PRPF39-202ENST00000424478 SYNJ2BP-COX16A0A087WUM0 186 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 CCL16O15467 120 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 SETSIPP0DME0 302 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 GJA1P17302 382 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 RFC1P35251 1148 aaPredicted RBP14.14□□□□□ -0.15
PRPF39-202ENST00000424478 SLC8A3P57103 927 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 GPC5P78333 572 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 SMAD3P84022 425 aaKnown RBP14.14□□□□□ -0.15
PRPF39-202ENST00000424478 OGDHQ02218 1023 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 KIF5AQ12840 1032 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 STILQ15468 1287 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 ZSCAN30Q86W11 494 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 COX16Q9P0S2 106 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 PACSIN2Q9UNF0 486 aaPredicted RBP14.14□□□□□ -0.15
PRPF39-202ENST00000424478 LZTS1Q9Y250 596 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 HCFC2Q9Y5Z7 792 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 FSCN2O14926 492 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 ADH1AP07327 375 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 ELF1P32519 619 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 FLT3P36888 993 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 CLCN4P51793 760 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 MAMLD1Q13495 774 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 KREMEN2Q8NCW0 462 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 TTC16Q8NEE8 873 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 VN1R2Q8NFZ6 395 aa14.14□□□□□ -0.15
PRPF39-202ENST00000424478 IPO4Q8TEX9 1081 aaKnown RBP14.14□□□□□ -0.15
PRPF39-202ENST00000424478 ADAM33Q9BZ11 813 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms