RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 EFCAB12Q6NXP0 572 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 FAM180BQ6P0A1 224 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 ZER1Q7Z7L7 766 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 NLRP14Q86W24 1093 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 IQCA1Q86XH1 822 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 RNF168Q8IYW5 571 aaPredicted RBP3.13□□□□□ -1.91
PMS1-209ENST00000424059 CEP57L1Q8IYX8 460 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 SMC1BQ8NDV3 1235 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 CCDC148Q8NFR7 591 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 TRIM58Q8NG06 486 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 OR14C36Q8NHC7 312 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 ZFP28Q8NHY6 868 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 GPT2Q8TD30 523 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 CNDP1Q96KN2 507 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 TBATAQ96M53 351 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 COG8Q96MW5 612 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 EIF2AK1Q9BQI3 630 aaKnown RBP3.13□□□□□ -1.91
PMS1-209ENST00000424059 UQCC2Q9BRT2 126 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 ADARB2Q9NS39 739 aaKnown RBP3.13□□□□□ -1.91
PMS1-209ENST00000424059 BLOC1S4Q9NUP1 217 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 TUBA8Q9NY65 449 aaPredicted RBP3.13□□□□□ -1.91
PMS1-209ENST00000424059 IL1RAPL1Q9NZN1 696 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 H2AFY2Q9P0M6 372 aaPredicted RBP3.13□□□□□ -1.91
PMS1-209ENST00000424059 GIMAP2Q9UG22 337 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 MRPL11Q9Y3B7 192 aaKnown RBP3.13□□□□□ -1.91
PMS1-209ENST00000424059 DGKBQ9Y6T7 804 aa3.13□□□□□ -1.91
PMS1-209ENST00000424059 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 CYP2D7A0A087X1C5 515 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 C17orf113A0A1B0GUU1 675 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 PRSS38A1L453 326 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 SYNDIG1LA6NDD5 238 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 MARCH11A6NNE9 402 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 GOLGA6L19H0YKK7 550 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 J3KRW8 73 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 MASP2O00187 686 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 XPOTO43592 962 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 TSPAN1O60635 241 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 DIAPH2O60879 1101 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 CFBP00751 764 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 S100A6P06703 90 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 PCNAP12004 261 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 GCFC2P16383 781 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 LMO1P25800 156 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 DDX6P26196 483 aaKnown RBP eCLIP3.12□□□□□ -1.91
PMS1-209ENST00000424059 CRHR1P34998 444 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 MAGEA9P43362 315 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 SCNN1BP51168 640 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 RENBPP51606 427 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ATXN1P54253 815 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 MANFP55145 182 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 ELLP55199 621 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 RRP1P56182 461 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 FAM189BP81408 668 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 TMF1P82094 1093 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 AKAP17AQ02040 695 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 NHLH2Q02577 135 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 HNRNPA0Q13151 305 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 SEMA3AQ14563 771 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ANKRD1Q15327 319 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 UBE3CQ15386 1083 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 BMT2Q1RMZ1 405 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 KRT71Q3SY84 523 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 Q4G0T1 1027 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 PRR16Q569H4 304 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 COLEC12Q5KU26 742 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 TATDN1Q6P1N9 297 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 C16orf86Q6ZW13 317 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 RSRC2Q7L4I2 434 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 LRRTM3Q86VH5 581 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 HOOK3Q86VS8 718 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ZNF354CQ86Y25 554 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 RAB11FIP4Q86YS3 637 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 GRAMD2AQ8IUY3 354 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 PDCL2Q8N4E4 241 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ENAHQ8N8S7 591 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 ZNF540Q8NDQ6 660 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 CPEB3Q8NE35 698 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 IL17REQ8NFR9 667 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 IPMKQ8NFU5 416 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 RASSF8Q8NHQ8 419 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 FAM81AQ8TBF8 368 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ZNF480Q8WV37 535 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 SNX33Q8WV41 574 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ARHGAP45Q92619 1136 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 GIMAP5Q96F15 307 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 C7orf25Q9BPX7 421 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 MTFR1LQ9H019 292 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ANKEF1Q9NU02 776 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 SLC5A4Q9NY91 659 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 WDR35Q9P2L0 1181 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 AGO2Q9UKV8 859 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 PLAAQ9Y263 795 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ZNF510Q9Y2H8 683 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 FPGT-TNNI3KV9GXZ4 949 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ARPC4-TTLL3A0A0A6YYG9 625 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ZNF891A8MT65 544 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 TTC34A8MYJ7 566 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 H0YC42 278 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 HOXC11O43248 304 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 PLOD3O60568 738 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms