RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ZBTB8OSQ8IWT0 167 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 MAB21L3Q8N8X9 362 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 TTC13Q8NBP0 860 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 SEPT1Q8WYJ6 367 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 KLRG1Q96E93 195 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 NUDCD1Q96RS6 583 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 ELOVL4Q9GZR5 314 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 RNPEPL1Q9HAU8 725 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDH1-202ENST00000422392 HEY2Q9UBP5 337 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 MICAL2O94851 1124 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 TRUB2O95900 331 aaKnown RBP16.5■□□□□ 0.23
CDH1-202ENST00000422392 MT-ND3P03897 115 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 PYGBP11216 843 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 BGNP21810 368 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 TAZQ16635 292 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 ZNF667Q5HYK9 610 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 FAM102AQ5T9C2 384 aaPredicted RBP16.5■□□□□ 0.23
CDH1-202ENST00000422392 ATF7IP2Q5U623 682 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 IER5Q5VY09 327 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 TRIM68Q6AZZ1 485 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 TRNP1Q6NT89 227 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 C1orf228Q6PIY5 440 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 MPZL3Q6UWV2 235 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 NCAPG2Q86XI2 1143 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 C1orf127Q8N9H9 656 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 TSSK1BQ9BXA7 367 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 PPCSQ9HAB8 311 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 EFR3BQ9Y2G0 817 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 ITGB3P05106 788 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 TROVE2P10155 538 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDH1-202ENST00000422392 NEFHP12036 1026 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 CLCN3P51790 818 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 CDH6P55285 790 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 TAF11Q15544 211 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 CFAP36Q96G28 342 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 LHX5Q9H2C1 402 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 SSU72Q9NP77 194 aaKnown RBP16.5■□□□□ 0.23
CDH1-202ENST00000422392 ARL8BQ9NVJ2 186 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 DONSONQ9NYP3 566 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 LOC285556D6RIA3 1793 aa16.5■□□□□ 0.23
CDH1-202ENST00000422392 WFS1O76024 890 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 RNF8O76064 485 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 TPBGLP0DKB5 382 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 GNAZP19086 355 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 CALB2P22676 271 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 SERPINB3P29508 390 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 SLC8A3P57103 927 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 PTPN11Q06124 597 aaPredicted RBP16.49■□□□□ 0.23
CDH1-202ENST00000422392 TTC7BQ86TV6 843 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 CMASQ8NFW8 434 aaPredicted RBP16.49■□□□□ 0.23
CDH1-202ENST00000422392 FNIP1Q8TF40 1166 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 CYTH2Q99418 400 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 TRIM56Q9BRZ2 755 aaKnown RBP16.49■□□□□ 0.23
CDH1-202ENST00000422392 GPATCH2LQ9NWQ4 482 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 TM9SF1O15321 606 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 MED7O43513 233 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 PTPN4P29074 926 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 ROR1Q01973 937 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 CDHR3Q6ZTQ4 885 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 STK32AQ8WU08 396 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 ADPGKQ9BRR6 497 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 PTPRHQ9HD43 1115 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 FETUBQ9UGM5 382 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 IKBKGQ9Y6K9 419 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 WDR90Q96KV7 1748 aa16.49■□□□□ 0.23
CDH1-202ENST00000422392 H7C0C1 242 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 UPP2O95045 317 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 PGK2P07205 417 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 PROZP22891 400 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 ABL2P42684 1182 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 ATP5OP48047 213 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 METTL7BQ6UX53 244 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 CHST13Q8NET6 341 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 TRPM4Q8TD43 1214 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 FAF2Q96CS3 445 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 CDT1Q9H211 546 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 KCNK13Q9HB14 408 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 E5RJQ4 531 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 GPR25O00155 361 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 NDC80O14777 642 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 B4GALT4O60513 344 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 INHBAP08476 426 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
CDH1-202ENST00000422392 ETV4P43268 484 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 RASSF2P50749 326 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 MXD4Q14582 209 aaPredicted RBP16.48■□□□□ 0.23
CDH1-202ENST00000422392 DALRD3Q5D0E6 543 aaKnown RBP16.48■□□□□ 0.23
CDH1-202ENST00000422392 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
CDH1-202ENST00000422392 TSHZ1Q6ZSZ6 1077 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 CYP4V2Q6ZWL3 525 aaPredicted RBP16.48■□□□□ 0.23
CDH1-202ENST00000422392 CTAGE3PQ8IX95 158 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 COPS5Q92905 334 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 MECRQ9BV79 373 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 TMEM120AQ9BXJ8 343 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 CADM1Q9BY67 442 aaKnown RBP16.48■□□□□ 0.23
CDH1-202ENST00000422392 TRIM55Q9BYV6 548 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 BCO2Q9BYV7 579 aa16.48■□□□□ 0.23
CDH1-202ENST00000422392 VPS11Q9H270 941 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms