RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, human

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-208	ENST00000422080	LEFTY2	O00292	366 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	ATG13	O75143	517 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	PIK3CA	P42336	1068 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	GALK1	P51570	392 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	ZXDB	P98169	803 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	FAM35A	Q86V20	835 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	FUK	Q8N0W3	1084 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	DCLK2	Q8N568	766 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	PDZD8	Q8NEN9	1154 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	SECISBP2L	Q93073	1101 aa	Known RBP	18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	KCNK16	Q96T55	309 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	P2RY13	Q9BPV8	354 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	IMPG2	Q9BZV3	1241 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	RNF38	Q9H0F5	515 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	LINC00597	Q9H2U6	94 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	CYP3A43	Q9HB55	503 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	DMAP1	Q9NPF5	467 aa	Predicted RBP	18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	RMND1	Q9NWS8	449 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	EP300	Q09472	2414 aa	Predicted RBP	18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	PATJ	Q8NI35	1801 aa		18.86	■□□□□ 0.61
HDLBP-208	ENST00000422080	TNFRSF10B	O14763	440 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	ABL1	P00519	1130 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	OAS1	P00973	400 aa	Known RBP	18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	GTF2H1	P32780	548 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	CNR2	P34972	360 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	ASPA	P45381	313 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	GCLM	P48507	274 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	NDST1	P52848	882 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	PPP3CA	Q08209	521 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	FBXO43	Q4G163	708 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	SNX30	Q5VWJ9	437 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	SPOPL	Q6IQ16	392 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	LONP2	Q86WA8	852 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	GPR161	Q8N6U8	529 aa	Known RBP	18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	TTC16	Q8NEE8	873 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	FBXO32	Q969P5	355 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	TMEM8A	Q9HCN3	771 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	NCDN	Q9UBB6	729 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	WDR87	Q6ZQQ6	2873 aa		18.85	■□□□□ 0.61
HDLBP-208	ENST00000422080	FAM92A	A1XBS5	289 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	CHURC1-FNTB	B4DL54	471 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	AP1G2	O75843	785 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	NFATC1	O95644	943 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	TRIM49	P0CI25	452 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	TRIM49C	P0CI26	452 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	TRIM21	P19474	475 aa	Known RBP	18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	FNTB	P49356	437 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	INCA1	Q0VD86	236 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	PNOC	Q13519	176 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	COBLL1	Q53SF7	1204 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	KIAA2013	Q8IYS2	634 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	CCDC150	Q8NCX0	1101 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	ENGASE	Q8NFI3	743 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	SCAMP5	Q8TAC9	235 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	TAS1R2	Q8TE23	839 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	CD101	Q93033	1021 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	GSDMA	Q96QA5	445 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	APOBEC3G	Q9HC16	384 aa	Known RBP	18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	CSNK1G1	Q9HCP0	422 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	C2orf42	Q9NWW7	574 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	RAB23	Q9ULC3	237 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	CPQ	Q9Y646	472 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	ZNF292	O60281	2723 aa		18.84	■□□□□ 0.61
HDLBP-208	ENST00000422080	GPR179	Q6PRD1	2367 aa		18.83	■□□□□ 0.61
HDLBP-208	ENST00000422080	SLC9A3R1	O14745	358 aa	Predicted RBP	18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	CETN3	O15182	167 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	SMC2	O95347	1197 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	EGF	P01133	1207 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	CCDC130	P13994	396 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	ID4	P47928	161 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	SLC5A3	P53794	718 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	DMWD	Q09019	674 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	IFRD2	Q12894	506 aa	Predicted RBP	18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	KRT39	Q6A163	491 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	SLC2A14	Q8TDB8	520 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	FAXDC2	Q96IV6	333 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	TIGD1	Q96MW7	591 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	SMO	Q99835	787 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	GTPBP4	Q9BZE4	634 aa	Known RBP	18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	KRT82	Q9NSB4	513 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	HMGXB4	Q9UGU5	601 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	CHORDC1	Q9UHD1	332 aa	Predicted RBP	18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	FANCM	Q8IYD8	2048 aa		18.83	■□□□□ 0.6
HDLBP-208	ENST00000422080	OTOGL	Q3ZCN5	2332 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	HR	O43593	1189 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	STX10	O60499	249 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	ZDHHC11B	P0C7U3	371 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	EPB41	P11171	864 aa	Known RBP	18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	PRCP	P42785	496 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	TUB	P50607	506 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	ORC1	Q13415	861 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	HECTD3	Q5T447	861 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	ZNF658	Q5TYW1	1059 aa	Predicted RBP	18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	WDR5B	Q86VZ2	330 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	ADGRG2	Q8IZP9	1017 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	C12orf29	Q8N999	325 aa		18.82	■□□□□ 0.6
HDLBP-208	ENST00000422080	ZMIZ2	Q8NF64	920 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms