RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 C3orf70A6NLC5 250 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 F2P00734 622 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 GNRH1P01148 92 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 KRT14P02533 472 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 RBP3P10745 1247 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 SYN1P17600 705 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 PAPOLAP51003 745 aaKnown RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 BST2Q10589 180 aaKnown RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 PCBP1Q15365 356 aaKnown RBP eCLIP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 MEA1Q16626 185 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 BOLA3Q53S33 107 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 KCNT1Q5JUK3 1230 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 ZNF784Q8NCA9 323 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 OSBPL8Q9BZF1 889 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 DMAC2Q9NW81 257 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 FAM47DPA6NHR8 397 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 LBX1P52954 281 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 PURAQ00577 322 aaKnown RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 TPCN2Q8NHX9 752 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 SPATA18Q8TC71 538 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 EPS8L1Q8TE68 723 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 CHMP6Q96FZ7 201 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 C16orf70Q9BSU1 422 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 FZD8Q9H461 694 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 DMAP1Q9NPF5 467 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 MRFAP1Q9Y605 127 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 GON4LQ3T8J9 2241 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 F9P00740 461 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 PBX1P40424 430 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 ARSEP51690 589 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 ADIGQ0VDE8 80 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 TTC23LQ6PF05 361 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 NYAP1Q6ZVC0 841 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 RCOR2Q8IZ40 523 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 RAB6BQ9NRW1 208 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 E5RI56 91 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 SCAMP3O14828 347 aaKnown RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 RNF40O75150 1001 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 SETSIPP0DME0 302 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 TROVE2P10155 538 aaKnown RBP eCLIP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 ACRP10323 421 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 YWHAQP27348 245 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 CYP2C18P33260 490 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 HOXD13P35453 343 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 GHRHRQ02643 423 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 MAPK8IP2Q13387 824 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 MTM1Q13496 603 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 SLC24A5Q71RS6 500 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 SPATA4Q8NEY3 305 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 PAWRQ96IZ0 340 aaKnown RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 FBXO44Q9H4M3 255 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 TLR8Q9NR97 1041 aaKnown RBP10.16□□□□□ -0.78
CMSS1-201ENST00000421999 AMACRQ9UHK6 382 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 INTUQ9ULD6 942 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 C2CD2Q9Y426 696 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 A0A0U1RQJ8 604 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 SEC31AO94979 1220 aaKnown RBP10.15□□□□□ -0.78
CMSS1-201ENST00000421999 ASS1P00966 412 aaKnown RBP10.15□□□□□ -0.78
CMSS1-201ENST00000421999 PLD1Q13393 1074 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 SLC12A1Q13621 1099 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 ARHGEF7Q14155 803 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 PPM1NQ8N819 430 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 SHC3Q92529 594 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 GPATCH2LQ9NWQ4 482 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 Q9Y3F1 56 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 CCL5P13501 91 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 CHRNA3P32297 505 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 PPM1AP35813 382 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 NFIL3Q16649 462 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 CLEC16AQ2KHT3 1053 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 GDF6Q6KF10 455 aaPredicted RBP10.15□□□□□ -0.78
CMSS1-201ENST00000421999 TMEM192Q8IY95 271 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 CARNMT1Q8N4J0 409 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 COG1Q8WTW3 980 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 FAM172AQ8WUF8 416 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 RAPGEF5Q92565 580 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 SMARCD1Q96GM5 515 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 ELOVL4Q9GZR5 314 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 SYNDIG1Q9H7V2 258 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 NDFIP2Q9NV92 336 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 FLRT1Q9NZU1 646 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 GTF2IRD1Q9UHL9 959 aa10.15□□□□□ -0.78
CMSS1-201ENST00000421999 URB1O60287 2271 aaKnown RBP10.15□□□□□ -0.78
CMSS1-201ENST00000421999 SMIM28A0A1B0GU29 152 aa10.15□□□□□ -0.79
CMSS1-201ENST00000421999 RASGRF2O14827 1237 aa10.15□□□□□ -0.79
CMSS1-201ENST00000421999 ADCY6O43306 1168 aa10.15□□□□□ -0.79
CMSS1-201ENST00000421999 ZNF865P0CJ78 1059 aaPredicted RBP10.15□□□□□ -0.79
CMSS1-201ENST00000421999 BRCC3P46736 316 aa10.15□□□□□ -0.79
CMSS1-201ENST00000421999 TM4SF4P48230 202 aa10.15□□□□□ -0.79
CMSS1-201ENST00000421999 KPNA2P52292 529 aaKnown RBP10.15□□□□□ -0.79
CMSS1-201ENST00000421999 RXFP2Q8WXD0 754 aa10.15□□□□□ -0.79
CMSS1-201ENST00000421999 N4BP2L2Q92802 583 aaPredicted RBP10.15□□□□□ -0.79
CMSS1-201ENST00000421999 TAS2R14Q9NYV8 317 aa10.15□□□□□ -0.79
CMSS1-201ENST00000421999 TUBGCP4Q9UGJ1 667 aa10.15□□□□□ -0.79
CMSS1-201ENST00000421999 TNS1Q9HBL0 1735 aaKnown RBP10.15□□□□□ -0.79
CMSS1-201ENST00000421999 PTPRZ1P23471 2315 aaPredicted RBP10.14□□□□□ -0.79
CMSS1-201ENST00000421999 FBXO21O94952 628 aa10.14□□□□□ -0.79
CMSS1-201ENST00000421999 NDUFV1P49821 464 aa10.14□□□□□ -0.79
CMSS1-201ENST00000421999 TARBP2Q15633 366 aaKnown RBP10.14□□□□□ -0.79
CMSS1-201ENST00000421999 TAF1BQ53T94 588 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms