RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 GLIS3Q8NEA6 775 aa17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 MRPL45Q9BRJ2 306 aaKnown RBP17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 PATE3B3GLJ2 98 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 KAT7O95251 611 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 KLF8O95600 359 aaPredicted RBP17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 ABL1P00519 1130 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 CST3P01034 146 aaPredicted RBP17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 APODP05090 189 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 CHRM1P11229 460 aaPredicted RBP17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 CEACAM1P13688 526 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 HNRNPLP14866 589 aaKnown RBP eCLIP17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 PTPN1P18031 435 aaKnown RBP17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 CSRP1P21291 193 aaKnown RBP17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 SYT1P21579 422 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 HOXD13P35453 343 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 IRX4P78413 519 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 ZNF252P-AS1Q0IIN9 211 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 TAF10Q12962 218 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 RHBDF2Q6PJF5 856 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 TTC30AQ86WT1 665 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 ALLCQ8N6M5 410 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 PDILTQ8N807 584 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 TXNDC5Q8NBS9 432 aaKnown RBP17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 OR6B3Q8NGW1 331 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 PIGKQ92643 395 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 HPS3Q969F9 1004 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 SLITRK1Q96PX8 696 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 LRRC27Q9C0I9 530 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 ELOVL4Q9GZR5 314 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 TNMDQ9H2S6 317 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 SMPD4Q9NXE4 827 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 CFAP97Q9P2B7 532 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 TBC1D14Q9P2M4 693 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 EVLQ9UI08 416 aaPredicted RBP17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 NME7Q9Y5B8 376 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 PLXND1Q9Y4D7 1925 aa17.96■□□□□ 0.47
UPF3AP3-201ENST00000420996 TNRC6BQ9UPQ9 1833 aaKnown RBP17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 EIF3DO15371 548 aaKnown RBP eCLIP17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 ADH1CP00326 375 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 TNNI1P19237 187 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 TIE1P35590 1138 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 P2RY2P41231 377 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 MESP2Q0VG99 397 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 SNRNP35Q16560 246 aaKnown RBP17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 EOGTQ5NDL2 527 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 SFTPA1Q8IWL2 248 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 RDH13Q8NBN7 331 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 ZNF507Q8TCN5 953 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 WHAMMQ8TF30 809 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 USP28Q96RU2 1077 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 POLMQ9NP87 494 aaPredicted RBP17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 WASF3Q9UPY6 502 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 CFAP47Q6ZTR5 3102 aa17.95■□□□□ 0.46
UPF3AP3-201ENST00000420996 SGK1O00141 431 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 TNFRSF10BO14763 440 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 DLATP10515 647 aaKnown RBP17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 ADH5P11766 374 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 GRIA2P42262 883 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 TNFRSF4P43489 277 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 KIR2DL1P43626 348 aaPredicted RBP17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 CACNA2D1P54289 1103 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 TNNC1P63316 161 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 FOXC1Q12948 553 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 PSMD6Q15008 389 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 WDR72Q3MJ13 1102 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 EMC10Q5UCC4 262 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 UNQ6494/PRO21346Q6UXR6 183 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 LPCAT2Q7L5N7 544 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 EPM2AIP1Q7L775 607 aaPredicted RBP17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 C12orf40Q86WS4 652 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 PDZD8Q8NEN9 1154 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 RLN3Q8WXF3 142 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 SPACA7Q96KW9 195 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 FNBP1Q96RU3 617 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 CGRRF1Q99675 332 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 B3GNT5Q9BYG0 378 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 ARHGEF4Q9NR80 690 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 TMEM30AQ9NV96 361 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 KBTBD4Q9NVX7 518 aa17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 MYO18AQ92614 2054 aaKnown RBP17.94■□□□□ 0.46
UPF3AP3-201ENST00000420996 E2F8A0AVK6 867 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 SCAMP3O14828 347 aaKnown RBP17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 MAP3K13O43283 966 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 TGFB1I1O43294 461 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 RTN3O95197 1032 aaPredicted RBP17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 STAU1O95793 577 aaKnown RBP17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 MBL2P11226 248 aaPredicted RBP17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 YWHAQP27348 245 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 AMPD3Q01432 767 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 CYP24A1Q07973 514 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 LMAN2Q12907 356 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 BYSLQ13895 437 aaKnown RBP17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 SPDYCQ5MJ68 293 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 NUP93Q8N1F7 819 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 B3GALNT2Q8NCR0 500 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 OVCA2Q8WZ82 227 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 OTUB2Q96DC9 234 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 NUSAP1Q9BXS6 441 aaKnown RBP17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 TRIM9Q9C026 710 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms