RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GNL1P36915 607 aaPredicted RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 CETN2P41208 172 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 CPT1AP50416 773 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 VCPP55072 806 aaKnown RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 PITX1P78337 314 aaPredicted RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 MSS51Q4VC12 460 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 GDF6Q6KF10 455 aaPredicted RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 EXOC3L1Q86VI1 746 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 FAM172AQ8WUF8 416 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 SLC35F5Q8WV83 523 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 MAIP1Q8WWC4 291 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 TRIB2Q92519 343 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 TLCD1Q96CP7 247 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 HAS3O00219 553 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 PTGESO14684 152 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 RPS6KA5O75582 802 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 GPD1P21695 349 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 MLH1P40692 756 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 GABRB2P47870 512 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 NDUFV1P49821 464 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 ZNF143P52747 638 aaPredicted RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 HADHQ16836 314 aaKnown RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 FAXCQ5TGI0 409 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 LRRC38Q5VT99 294 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 OLFML1Q6UWY5 402 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 SPATA18Q8TC71 538 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 GAD1Q99259 594 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 MIOSQ9NXC5 875 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 FEZ2Q9UHY8 353 aaPredicted RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 ABT1Q9ULW3 272 aaKnown RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 MRPL42Q9Y6G3 142 aaKnown RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 ELNP15502 786 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 RGS2P41220 211 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 EIF3BP55884 814 aaKnown RBP9.21□□□□□ -0.93
SNCA-206ENST00000420646 LILRA4P59901 499 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 TAP1Q03518 808 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 PKDCCQ504Y2 493 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 KIAA0319Q5VV43 1072 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 HIBCHQ6NVY1 386 aaPredicted RBP9.21□□□□□ -0.93
SNCA-206ENST00000420646 NLRP14Q86W24 1093 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 OSTM1Q86WC4 334 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 ZBED8Q8IZ13 594 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 PYROXD2Q8N2H3 581 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 SLC35B2Q8TB61 432 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 MYCBPAPQ8TBZ2 947 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 HASPINQ8TF76 798 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 RUNDC3BQ96NL0 473 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 EPN3Q9H201 632 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 CNTN3Q9P232 1028 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 RRP15Q9Y3B9 282 aaKnown RBP9.21□□□□□ -0.93
SNCA-206ENST00000420646 MFHAS1Q9Y4C4 1052 aa9.21□□□□□ -0.93
SNCA-206ENST00000420646 POC1B-GALNT4F8VUJ3 575 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 PIRO00625 290 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 AVILO75366 819 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 KRT7P08729 469 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 RBP3P10745 1247 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 IL4RP24394 825 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 MAGEA4P43358 317 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 CTCFP49711 727 aaPredicted RBP9.21□□□□□ -0.94
SNCA-206ENST00000420646 FLT3LGP49771 235 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 MPP2Q14168 576 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 FNBP1LQ5T0N5 605 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 AGBL2Q5U5Z8 902 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 WSCD1Q658N2 575 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 HOOK3Q86VS8 718 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 C10orf67Q8IYJ2 551 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 ANKRD42Q8N9B4 389 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 CMASQ8NFW8 434 aaPredicted RBP9.21□□□□□ -0.94
SNCA-206ENST00000420646 ZNF473Q8WTR7 871 aaKnown RBP9.21□□□□□ -0.94
SNCA-206ENST00000420646 PRMT1Q99873 361 aaKnown RBP9.21□□□□□ -0.94
SNCA-206ENST00000420646 RHOBTB2Q9BYZ6 727 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 AGO3Q9H9G7 860 aaKnown RBP9.21□□□□□ -0.94
SNCA-206ENST00000420646 KIF9Q9HAQ2 790 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 PLEKHA5Q9HAU0 1116 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 HESX1Q9UBX0 185 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 ST3GAL5Q9UNP4 418 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 CDY2AQ9Y6F7 541 aa9.21□□□□□ -0.94
SNCA-206ENST00000420646 CASTOR2A6NHX0 329 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 F8W810 466 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 PRPSAP2O60256 369 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 CHRNA1P02708 482 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 IVLP07476 585 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 RPL22P35268 128 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 EIF3EP60228 445 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 PPP1R2P3Q6NXS1 205 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 TAX1BP1Q86VP1 789 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 C3orf58Q8NDZ4 430 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 GSTCDQ8NEC7 633 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 ADAM32Q8TC27 787 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 CNPY3Q9BT09 278 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 HOMER3Q9NSC5 361 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 DDX56Q9NY93 547 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 UBQLN1Q9UMX0 589 aaKnown RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 ZSWIM8A7E2V4 1837 aa9.2□□□□□ -0.94
SNCA-206ENST00000420646 MANSC4A6NHS7 340 aaPredicted RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 DNALI1O14645 258 aaPredicted RBP9.2□□□□□ -0.94
SNCA-206ENST00000420646 SSTR1P30872 391 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms