RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 KCNH2Q12809 1159 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 GRM2Q14416 872 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 MLF2Q15773 248 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-211ENST00000420363 TXNDC8Q6A555 127 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 ZC3H14Q6PJT7 736 aaKnown RBP22.65■■□□□ 1.22
CPNE1-211ENST00000420363 CELF5Q8N6W0 485 aaKnown RBP22.65■■□□□ 1.22
CPNE1-211ENST00000420363 MAB21L3Q8N8X9 362 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 PDZD8Q8NEN9 1154 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 NT5C1BQ96P26 610 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 SLITRK1Q96PX8 696 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 DDX23Q9BUQ8 820 aaKnown RBP22.65■■□□□ 1.22
CPNE1-211ENST00000420363 IL37Q9NZH6 218 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 KANSL1LA0AUZ9 987 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 ARNTLO00327 626 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 TNFRSF10BO14763 440 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 CHADO15335 359 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 SP9P0CG40 484 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 SLC5A3P53794 718 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 UBR7Q8N806 425 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 LMO3Q8TAP4 145 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 CYFIP2Q96F07 1278 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 KCNK16Q96T55 309 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 SMOQ99835 787 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 THAP9Q9H5L6 903 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 TRPM5Q9NZQ8 1165 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 WDR87Q6ZQQ6 2873 aa22.64■■□□□ 1.21
CPNE1-211ENST00000420363 EP300Q09472 2414 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-211ENST00000420363 MYO16Q9Y6X6 1858 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 TRAV19A0A0A6YYK7 116 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 FAM92AA1XBS5 289 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 ZNF263O14978 683 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 GLULP15104 373 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 GDI1P31150 447 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 ID4P47928 161 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 RAD23BP54727 409 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 MLLT6P55198 1093 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-211ENST00000420363 PLCB2Q00722 1185 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 GCNT1Q02742 428 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 UBXN2BQ14CS0 331 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 ARHGAP29Q52LW3 1261 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 CLEC20AQ6ZU45 233 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 FAM114A1Q8IWE2 563 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 YAF2Q8IY57 180 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 SLC4A11Q8NBS3 891 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 ZMIZ2Q8NF64 920 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 BPIFB1Q8TDL5 484 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 TMEM176AQ96HP8 235 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 OSBPL6Q9BZF3 934 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 GCNT4Q9P109 453 aa22.63■■□□□ 1.21
CPNE1-211ENST00000420363 ZNF840PA6NDX5 716 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 USP17L7P0C7H9 530 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 TCF3P15923 654 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 YWHAQP27348 245 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 ADORA2BP29275 332 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 TPD52L1Q16890 204 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-211ENST00000420363 ARHGAP17Q68EM7 881 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 IRF2BP1Q8IU81 584 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 USP13Q92995 863 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-211ENST00000420363 MSANTD3Q96H12 275 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 NELL2Q99435 816 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 TDP1Q9NUW8 608 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 MIA3Q5JRA6 1907 aa22.62■■□□□ 1.21
CPNE1-211ENST00000420363 FAM170BA6NMN3 283 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 MAP3K7CLP57077 242 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 TAF10Q12962 218 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 USP4Q13107 963 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 ZNF394Q53GI3 561 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 PPP1R26Q5T8A7 1209 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-211ENST00000420363 FBXO32Q969P5 355 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 LRRC3BQ96PB8 259 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 FBXO44Q9H4M3 255 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 TRPC7Q9HCX4 862 aa22.61■■□□□ 1.21
CPNE1-211ENST00000420363 SPATA6Q9NWH7 488 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-211ENST00000420363 C2orf78A6NCI8 922 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 BEST1O76090 585 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 OLFM2O95897 454 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 CKMP06732 381 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 PRKCSHP14314 528 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-211ENST00000420363 TUBP50607 506 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 SNX30Q5VWJ9 437 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 C1orf228Q6PIY5 440 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 PPM1KQ8N3J5 372 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 EHBP1Q8NDI1 1231 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 HEXIM2Q96MH2 286 aaKnown RBP22.6■■□□□ 1.21
CPNE1-211ENST00000420363 HINFPQ9BQA5 517 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 DUSP16Q9BY84 665 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 SMG9Q9H0W8 520 aaKnown RBP22.6■■□□□ 1.21
CPNE1-211ENST00000420363 THG1LQ9NWX6 298 aaKnown RBP22.6■■□□□ 1.21
CPNE1-211ENST00000420363 ARHGAP26Q9UNA1 814 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 CCL26Q9Y258 94 aa22.6■■□□□ 1.21
CPNE1-211ENST00000420363 MTF2Q9Y483 593 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-211ENST00000420363 GTPBP10A4D1E9 387 aaKnown RBP22.59■■□□□ 1.21
CPNE1-211ENST00000420363 LAMTOR5O43504 91 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 OAS1P00973 400 aaKnown RBP22.59■■□□□ 1.21
CPNE1-211ENST00000420363 ZDHHC11BP0C7U3 371 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 CD72P21854 359 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 LRMPQ12912 555 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 ZNF77Q15935 545 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 CCDC183Q5T5S1 534 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 SMYD5Q6GMV2 418 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms