RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DEPDC7Q96QD5 511 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CHORDC1Q9UHD1 332 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 SNX8Q9Y5X2 465 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 E9PCH4 1651 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CYP2C8P10632 490 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 KLRC1P26715 233 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 MAGEA4P43358 317 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 BCAT1P54687 386 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 GEMP55040 296 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 TOMM20Q15388 145 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 MYO1HQ8N1T3 1032 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 KCTD17Q8N5Z5 321 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 MAGED4Q96JG8 741 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 MRFAP1Q9Y605 127 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RHOBTB3O94955 611 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 POTEAQ6S8J7 498 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 RUBCNQ92622 972 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 ZNF333Q96JL9 665 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 VPS33BQ9H267 617 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 ABCA6Q8N139 1617 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 RNF103O00237 685 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 DAB1O75553 588 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 ACAD10Q6JQN1 1059 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 P3H2Q8IVL5 708 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 CRTAMO95727 393 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 EDRF1Q3B7T1 1238 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 DNAL1Q4LDG9 190 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 CNDP1Q96KN2 507 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 SHCBP1LQ9BZQ2 653 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 ARL2BPQ9Y2Y0 163 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 RPS6KL1Q9Y6S9 549 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 MYH10P35580 1976 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 STAU1O95793 577 aaKnown RBP11.6□□□□□ -0.55
PTCH1-205ENST00000418258 CLK1P49759 484 aaKnown RBP11.6□□□□□ -0.55
PTCH1-205ENST00000418258 FXR2P51116 673 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTCH1-205ENST00000418258 ITPK1Q13572 414 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 ZNF280DQ6N043 979 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 MPZL3Q6UWV2 235 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 STOX1Q6ZVD7 989 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 CD302Q8IX05 232 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 MTG1Q9BT17 334 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-205ENST00000418258 MYO9BQ13459 2157 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 AGTP01019 485 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 CCNG1P51959 295 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 GPRC5CQ9NQ84 441 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 MIEF1Q9NQG6 463 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.6□□□□□ -0.55
PTCH1-205ENST00000418258 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 TDRKHQ9Y2W6 561 aaKnown RBP11.6□□□□□ -0.55
PTCH1-205ENST00000418258 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 AMHP03971 560 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 GARTP22102 1010 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 RRM2P31350 389 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 ITGA8P53708 1063 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 RHOAP61586 193 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 GJB7Q6PEY0 223 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 C16orf62Q7Z3J2 963 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 LONP2Q86WA8 852 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 KIAA2013Q8IYS2 634 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 ARMC2Q8NEN0 867 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 CAMKK2Q96RR4 588 aa11.6□□□□□ -0.55
PTCH1-205ENST00000418258 OGTO15294 1046 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 SUPT7LO94864 414 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 TFDP3Q5H9I0 405 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 OSMRQ99650 979 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 NCKAP1Q9Y2A7 1128 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 AGRPO00253 132 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PDHXO00330 501 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PLA2G6O60733 806 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 CYP7B1O75881 506 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 MSH3P20585 1137 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 STK4Q13043 487 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 BTG3Q14201 252 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 USP39Q53GS9 565 aaKnown RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 FAXCQ5TGI0 409 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PARP9Q8IXQ6 854 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 B3GALNT2Q8NCR0 500 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 SGF29Q96ES7 293 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 SPACA7Q96KW9 195 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PRMT6Q96LA8 375 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 NT5MQ9NPB1 228 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 TRPC5OSA6NMA1 111 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 ENO2P09104 434 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 VEGFAP15692 232 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 ALDH9A1P49189 494 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 EXOSC10Q01780 885 aaKnown RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 PRKAA1Q13131 559 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 SHROOM1Q2M3G4 852 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-205ENST00000418258 FBXO33Q7Z6M2 555 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 DEFB132Q7Z7B7 95 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 CENPTQ96BT3 561 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 KCNK16Q96T55 309 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 MTFR1LQ9H019 292 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 NDOR1Q9UHB4 597 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 FYNP06241 537 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 DMTNQ08495 405 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 ARHGAP17Q68EM7 881 aa11.59□□□□□ -0.55
PTCH1-205ENST00000418258 TRMT11Q7Z4G4 463 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms