RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CYFIP2Q96F07 1278 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 TRIM11Q96F44 468 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 TMEM176AQ96HP8 235 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 TUBB2BQ9BVA1 445 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 HERC2P3Q9BVR0 1158 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 FAM124BQ9H5Z6 455 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 MIOSQ9NXC5 875 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 KANSL3Q9P2N6 904 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 SALL4Q9UJQ4 1053 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 JRKLQ9Y4A0 524 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 CAPN6Q9Y6Q1 641 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 ZNF292O60281 2723 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 CLUHO75153 1309 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 CCDC195A0A1B0GUA6 201 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 PODXLO00592 558 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 ENC1O14682 589 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 INPPL1O15357 1258 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 RFPL2O75678 378 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 GLUD1P00367 558 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 ADH1AP07327 375 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 LRPAP1P30533 357 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 SGO2Q562F6 1265 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 SYCE1Q8N0S2 351 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 SLC4A11Q8NBS3 891 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 TMEM35BQ8NCS4 154 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 ARHGEF26Q96DR7 871 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 MYADMQ96S97 322 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 MRPL45Q9BRJ2 306 aaKnown RBP13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 ELOVL4Q9GZR5 314 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 WNT16Q9UBV4 365 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 KIAA1257Q9ULG3 409 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 CA14Q9ULX7 337 aa13.92□□□□□ -0.18
HLA-DMB-258ENST00000418107 CASTOR2A6NHX0 329 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 TMEM110-MUSTN1A8MSY1 372 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 CYB561D2O14569 222 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 LSM8O95777 96 aaKnown RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 CYP1A1P04798 512 aaPredicted RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 ATP1A1P05023 1023 aaKnown RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 SPATA31D3P0C874 917 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 MYBL1P10243 752 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 VDRP11473 427 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 RPL9P32969 192 aaKnown RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 GNL1P36915 607 aaPredicted RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 OR1G1P47890 313 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 GLUD2P49448 558 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 LILRA4P59901 499 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 INCA1Q0VD86 236 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 GRIK3Q13003 919 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 DSTYKQ6XUX3 929 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 SPATA31D4Q6ZUB0 917 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 DAAM2Q86T65 1068 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 COLGALT2Q8IYK4 626 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 MSANTD4Q8NCY6 345 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 MNS1Q8NEH6 495 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 TPCN2Q8NHX9 752 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 RIN2Q8WYP3 895 aaPredicted RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 TFAP2BQ92481 460 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 SMG7Q92540 1137 aaKnown RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 DDX27Q96GQ7 796 aaKnown RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 CALR3Q96L12 384 aaKnown RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 GDAP2Q9NXN4 497 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 ADAM22Q9P0K1 906 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 EPS15L1Q9UBC2 864 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 CNOT8Q9UFF9 292 aaKnown RBP13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 HMGXB4Q9UGU5 601 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 DMXL1Q9Y485 3027 aa13.91□□□□□ -0.18
HLA-DMB-258ENST00000418107 GRID2IPA4D2P6 1211 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 A8MXQ7 604 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 F8W810 466 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 FANCGO15287 622 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 ATMINO43313 823 aaPredicted RBP13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 FTCDO95954 541 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 UNGP13051 313 aaPredicted RBP13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 NOMO3P69849 1222 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 CENPCQ03188 943 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 KIAA0319Q5VV43 1072 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 ELMSAN1Q6PJG2 1045 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 ACOT1Q86TX2 421 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 UNC93AQ86WB7 457 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 RNF168Q8IYW5 571 aaPredicted RBP13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 MCOLN2Q8IZK6 566 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 SLC44A3Q8N4M1 653 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 WHAMMQ8TF30 809 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 ZNF707Q96C28 371 aaPredicted RBP13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 TWNKQ96RR1 684 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 C11orf70Q9BRQ4 267 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 NUP85Q9BW27 656 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 ZNF518BQ9C0D4 1074 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 TBC1D17Q9HA65 648 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 RXFP1Q9HBX9 757 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 CDC23Q9UJX2 597 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 PCDHGC3Q9UN70 934 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 SAR1BQ9Y6B6 198 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 R4GN57 208 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 DNAH14Q0VDD8 3507 aa13.9□□□□□ -0.18
HLA-DMB-258ENST00000418107 M0QYV0 167 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms