RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CWH43Q9H720 699 aa17.84■□□□□ 0.45
CALD1-204ENST00000417172 PI4K2BG5E9Z4 385 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 KRIT1O00522 736 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 PSTPIP1O43586 416 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 PDGFRAP16234 1089 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 GPD1P21695 349 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 PAX3P23760 479 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 ATP11AP98196 1134 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 ADCY1Q08828 1119 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 SMTNL2Q2TAL5 461 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 SLC39A12Q504Y0 691 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 KLHL7Q8IXQ5 586 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 SPATA18Q8TC71 538 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 FNIP1Q8TF40 1166 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 TOP1MTQ969P6 601 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 SMARCD1Q96GM5 515 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 HSFY1Q96LI6 401 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 KRT12Q99456 494 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 COLEC11Q9BWP8 271 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 ZWILCHQ9H900 591 aa17.83■□□□□ 0.44
CALD1-204ENST00000417172 HHLA1C9JL84 531 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 TRAPPC3O43617 180 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 ZMYND10O75800 440 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 OAZ2O95190 189 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 TKTL1P51854 596 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 ZNF143P52747 638 aaPredicted RBP17.82■□□□□ 0.44
CALD1-204ENST00000417172 SLC8A3P57103 927 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 TSPY1Q01534 308 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 SLC7A5Q01650 507 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 SLC25A11Q02978 314 aaKnown RBP17.82■□□□□ 0.44
CALD1-204ENST00000417172 ITIH3Q06033 890 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 CCDC14Q49A88 953 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 RTP2Q5QGT7 225 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 SEL1L2Q5TEA6 688 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 MMGT1Q8N4V1 131 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 STKLD1Q8NE28 680 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 ANKRD7Q92527 254 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 PARD6BQ9BYG5 372 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 PCSK1NQ9UHG2 260 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 MYO16Q9Y6X6 1858 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 ABHD14A-ACY1A0A1B0GW23 586 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 ACADSBP45954 432 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 KCNT1Q5JUK3 1230 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 HFE2Q6ZVN8 426 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 C16orf59Q7L2K0 433 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 TMEM199Q8N511 208 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 GPR161Q8N6U8 529 aaKnown RBP17.82■□□□□ 0.44
CALD1-204ENST00000417172 RNF25Q96BH1 459 aaPredicted RBP17.82■□□□□ 0.44
CALD1-204ENST00000417172 PGLYRP2Q96PD5 576 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 PEBP4Q96S96 227 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 DDX47Q9H0S4 455 aaKnown RBP17.82■□□□□ 0.44
CALD1-204ENST00000417172 LRRC4Q9HBW1 653 aa17.82■□□□□ 0.44
CALD1-204ENST00000417172 TTC7AQ9ULT0 858 aaPredicted RBP17.82■□□□□ 0.44
CALD1-204ENST00000417172 SF3B1O75533 1304 aaKnown RBP eCLIP17.81■□□□□ 0.44
CALD1-204ENST00000417172 ARHGEF37A1IGU5 675 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 CYP2F1P24903 491 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 CTXN3Q4LDR2 81 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 ZFYVE27Q5T4F4 411 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 FBXO38Q6PIJ6 1188 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 RSPO2Q6UXX9 243 aaPredicted RBP17.81■□□□□ 0.44
CALD1-204ENST00000417172 SLC26A9Q7LBE3 791 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 CCDC50Q8IVM0 306 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 KCTD13Q8WZ19 329 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 TMEM175Q9BSA9 504 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 VN1R3Q9BXE9 311 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 ULBP1Q9BZM6 244 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 CYLDQ9NQC7 956 aa17.81■□□□□ 0.44
CALD1-204ENST00000417172 ABI2Q9NYB9 513 aaPredicted RBP17.81■□□□□ 0.44
CALD1-204ENST00000417172 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.81■□□□□ 0.44
CALD1-204ENST00000417172 SYN3O14994 580 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 AMHP03971 560 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 KRT1P04264 644 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 FGFR3P22607 806 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 MIPP30301 263 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 ATXN1P54253 815 aaKnown RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 ARPP19P56211 112 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 FAM43BQ6ZT52 329 aaPredicted RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 SLC13A5Q86YT5 568 aaPredicted RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 ZDHHC17Q8IUH5 632 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 KATNAL2Q8IYT4 538 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 SIX6OS1Q8N1H7 587 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 TTC9BQ8N6N2 239 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 RAPGEF5Q92565 580 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 FAM149B1Q96BN6 582 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 ZNF689Q96CS4 500 aaPredicted RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 CNPY3Q9BT09 278 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 HEMGNQ9BXL5 484 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 ZCWPW1Q9H0M4 648 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 RC3H2Q9HBD1 1191 aaKnown RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 CSNK1G1Q9HCP0 422 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 CALCOCO1Q9P1Z2 691 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 ZNF638Q14966 1978 aaKnown RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 USP17L7P0C7H9 530 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 SNX16P57768 344 aa17.8■□□□□ 0.44
CALD1-204ENST00000417172 PITX1P78337 314 aaPredicted RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 MRPS5P82675 430 aaKnown RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 RBM10P98175 930 aaKnown RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 PRSS55Q6UWB4 352 aaPredicted RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 CYP4V2Q6ZWL3 525 aaPredicted RBP17.8■□□□□ 0.44
CALD1-204ENST00000417172 SPATA2LQ8IUW3 424 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms