RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 RASSF3Q86WH2 238 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 CBWD2Q8IUF1 395 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 ELMO3Q96BJ8 720 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 ACCSQ96QU6 501 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 GDAP2Q9NXN4 497 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 ZMYM5Q9UJ78 669 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 ZMIZ1Q9ULJ6 1067 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
LINC00339-202ENST00000416769 SGK1O00141 431 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 RHOBTB1O94844 696 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 IDEP14735 1019 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 PFKFB1P16118 471 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 SCP2P22307 547 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 PTGER3P43115 390 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 DHPSP49366 369 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-202ENST00000416769 KDSRQ06136 332 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 RRAGBQ5VZM2 374 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 LIMS2Q7Z4I7 341 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 TOP6BLQ8N6T0 577 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 LRRC52Q8N7C0 313 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 DEFB124Q8NES8 71 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 ENGASEQ8NFI3 743 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 PIGKQ92643 395 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 WBP2Q969T9 261 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 ACDQ96AP0 544 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 HVCN1Q96D96 273 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 FNBP1Q96RU3 617 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
LINC00339-202ENST00000416769 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 TMEM74BQ9NUR3 256 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 UXTQ9UBK9 157 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-202ENST00000416769 USP25Q9UHP3 1055 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 MBD1Q9UIS9 605 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-202ENST00000416769 ITGA11Q9UKX5 1188 aa13.78□□□□□ -0.2
LINC00339-202ENST00000416769 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
LINC00339-202ENST00000416769 ZNF202O95125 648 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 KLF8O95600 359 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-202ENST00000416769 HOXD13P35453 343 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 TIE1P35590 1138 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 SYKP43405 635 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 NDUFA8P51970 172 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 RBP5P82980 135 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 AMPD2Q01433 879 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 CYP27A1Q02318 531 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 IFRD2Q12894 506 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-202ENST00000416769 POSTNQ15063 836 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 CRY1Q16526 586 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 MDH1BQ5I0G3 518 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 CYP2U1Q7Z449 544 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 NT5DC4Q86YG4 428 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 TMEFF1Q8IYR6 380 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 TMEM86AQ8N2M4 240 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 IQUBQ8NA54 791 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 TXNDC5Q8NBS9 432 aaKnown RBP13.77□□□□□ -0.21
LINC00339-202ENST00000416769 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 HPDLQ96IR7 371 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
LINC00339-202ENST00000416769 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 GOLPH3LQ9H4A5 285 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 STK17AQ9UEE5 414 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 MMP17Q9ULZ9 603 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 CPQQ9Y646 472 aa13.77□□□□□ -0.21
LINC00339-202ENST00000416769 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 ZNF840PA6NDX5 716 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 SOBPA7XYQ1 873 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 F8VP50 259 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 CLDN5O00501 218 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 TRIM24O15164 1050 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 ADAM23O75077 832 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 ABL1P00519 1130 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 TMEM191BP0C7N4 346 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 GRIK1P39086 918 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 MAGEA11P43364 429 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 MAPK8P45983 427 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 POU5F1Q01860 360 aaKnown RBP13.76□□□□□ -0.21
LINC00339-202ENST00000416769 DHCR24Q15392 516 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 E2F4Q16254 413 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 USP39Q53GS9 565 aaKnown RBP13.76□□□□□ -0.21
LINC00339-202ENST00000416769 SYCP3Q8IZU3 236 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 FMR1NBQ8N0W7 255 aaPredicted RBP13.76□□□□□ -0.21
LINC00339-202ENST00000416769 PDILTQ8N807 584 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 IL17RCQ8NAC3 791 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 OR2I1PQ8NGU4 316 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 OLIG1Q8TAK6 271 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 INTS13Q9NVM9 706 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 HCN2Q9UL51 889 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 WDFY3Q8IZQ1 3526 aa13.76□□□□□ -0.21
LINC00339-202ENST00000416769 SPAARA0A1B0GVQ0 90 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms