RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 RAB1AP62820 205 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 TCP10Q12799 353 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 TOP3AQ13472 1001 aaPredicted RBP6.9□□□□□ -1.3
EPHA4-204ENST00000415749 SPIDRQ14159 915 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 CCDC57Q2TAC2 916 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 INTS11Q5TA45 600 aaKnown RBP6.9□□□□□ -1.3
EPHA4-204ENST00000415749 Q6ZUG5 572 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 OR14C36Q8NHC7 312 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 TBC1D22AQ8WUA7 517 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 RGMAQ96B86 450 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 ERP27Q96DN0 273 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 DYDC2Q96IM9 177 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 TTLL2Q9BWV7 592 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 ZMAT3Q9HA38 289 aaKnown RBP6.9□□□□□ -1.3
EPHA4-204ENST00000415749 ITM2CQ9NQX7 267 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 SMC4Q9NTJ3 1288 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 CLIC5Q9NZA1 410 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 PDP2Q9P2J9 529 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 MYH3P11055 1940 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 FGF18O76093 207 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 MBD4O95243 580 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 DHRS4L1P0CG22 281 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 TSHRP16473 764 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 RPL17P18621 184 aaKnown RBP6.89□□□□□ -1.31
EPHA4-204ENST00000415749 GCLCP48506 637 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-204ENST00000415749 KCNQ1P51787 676 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 NRG3P56975 720 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 GNAI1P63096 354 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 POU5F1Q01860 360 aaKnown RBP6.89□□□□□ -1.31
EPHA4-204ENST00000415749 DSC2Q02487 901 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 PPARAQ07869 468 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 MALLQ13021 153 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 PMS2P11Q13670 270 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
EPHA4-204ENST00000415749 MAN2A1Q16706 1144 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 FAM110CQ1W6H9 321 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 MAP3K21Q5TCX8 1036 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 MCTP2Q6DN12 878 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 FAM180BQ6P0A1 224 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 C1orf122Q6ZSJ8 110 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 G2E3Q7L622 706 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 FAM124AQ86V42 546 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 LYSMD2Q8IV50 215 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 SCYL3Q8IZE3 742 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 TXNDC5Q8NBS9 432 aaKnown RBP6.89□□□□□ -1.31
EPHA4-204ENST00000415749 NUDT10Q8NFP7 164 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 ADAMTS17Q8TE56 1095 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 GAB3Q8WWW8 586 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 FATE1Q969F0 183 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 HDAC10Q969S8 669 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 NUDT11Q96G61 164 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 SENP6Q9GZR1 1112 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-204ENST00000415749 ZNF287Q9HBT7 754 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 POLR3BQ9NW08 1133 aaPredicted RBP6.89□□□□□ -1.31
EPHA4-204ENST00000415749 PRSS50Q9UI38 385 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 USP18Q9UMW8 372 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 CRYL1Q9Y2S2 319 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 VWA7Q9Y334 891 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 CEP83Q9Y592 693 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 NCOR1O75376 2440 aa6.89□□□□□ -1.31
EPHA4-204ENST00000415749 ARAP2Q8WZ64 1704 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 COL2A1P02458 1487 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 RPAP1Q9BWH6 1393 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 EYA2O00167 538 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 FOXN3O00409 490 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 FFAR2O15552 330 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 PHGDHO43175 533 aaKnown RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 FIBPO43427 364 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 FRS3O43559 492 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 CNOT4O95628 575 aaKnown RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 HARSP12081 509 aaKnown RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 PDIA3P30101 505 aaKnown RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 RXRGP48443 463 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 MEOX1P50221 254 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 PDE1CQ14123 709 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 FGL2Q14314 439 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 C9orf50Q5SZB4 431 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 CDC42EP5Q6NZY7 148 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 KLHDC10Q6PID8 442 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 ZFPM1Q8IX07 1006 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 TSPYL6Q8N831 410 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 USP38Q8NB14 1042 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 TRIB2Q92519 343 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 GFM2Q969S9 779 aaKnown RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 LCORQ96JN0 433 aaPredicted RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 SPATA25Q9BR10 227 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 STK31Q9BXU1 1019 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 HAPLN2Q9GZV7 340 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 KATNBL1Q9H079 304 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 PNPLA8Q9NP80 782 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 GRHPRQ9UBQ7 328 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 CDC42EP3Q9UKI2 254 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 AGTPBP1Q9UPW5 1226 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 CFAP20Q9Y6A4 193 aaKnown RBP6.88□□□□□ -1.31
EPHA4-204ENST00000415749 AK9Q5TCS8 1911 aa6.88□□□□□ -1.31
EPHA4-204ENST00000415749 PRUNE2Q8WUY3 3088 aa6.87□□□□□ -1.31
EPHA4-204ENST00000415749 DDX60LQ5H9U9 1706 aaKnown RBP6.87□□□□□ -1.31
EPHA4-204ENST00000415749 MAST3O60307 1309 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms