RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 M0QYV0 167 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 AP5Z1O43299 807 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 THAP12O43422 761 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 TADA3O75528 432 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 LSM8O95777 96 aaKnown RBP12.58□□□□□ -0.4
ATG4B-207ENST00000415107 PNMA6AP0CW24 399 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-207ENST00000415107 BMP1P13497 986 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 FSHRP23945 695 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 HNRNPH3P31942 346 aaKnown RBP12.58□□□□□ -0.4
ATG4B-207ENST00000415107 USP8P40818 1118 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 CCR2P41597 374 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 TUBP50607 506 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 MAP3K7CLP57077 242 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 ZBED6P86452 979 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 PDE4CQ08493 712 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 CLUL1Q15846 466 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 SLC5A9Q2M3M2 681 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 PM20D1Q6GTS8 502 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 TRIM72Q6ZMU5 477 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 GAREM2Q75VX8 874 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 OTOP3Q7RTS5 596 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
ATG4B-207ENST00000415107 ADHFE1Q8IWW8 467 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 CORO1BQ9BR76 489 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 SYT11Q9BT88 431 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 ZNF334Q9HCZ1 680 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-207ENST00000415107 ACP6Q9NPH0 428 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 SCML2Q9UQR0 700 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 MRPS23Q9Y3D9 190 aaKnown RBP12.58□□□□□ -0.4
ATG4B-207ENST00000415107 NR2E1Q9Y466 385 aa12.58□□□□□ -0.4
ATG4B-207ENST00000415107 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 LOC730098B7Z3J9 87 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 OLFM2O95897 454 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 IL9P15248 144 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 YWHAQP27348 245 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 GABRR2P28476 465 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 ACADSBP45954 432 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 PSEN1P49768 467 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 USP46P62068 366 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 CDR2Q01850 454 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 MTMR3Q13615 1198 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 TAF12Q16514 161 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 SDHAF4Q5VUM1 108 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 IRF2BP2Q7Z5L9 587 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 TMEM110Q86TL2 294 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 NOP9Q86U38 636 aaKnown RBP12.57□□□□□ -0.4
ATG4B-207ENST00000415107 NPAS3Q8IXF0 933 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 ZDHHC14Q8IZN3 488 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-207ENST00000415107 SHKBP1Q8TBC3 707 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 GIPC2Q8TF65 315 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 SECISBP2LQ93073 1101 aaKnown RBP12.57□□□□□ -0.4
ATG4B-207ENST00000415107 GCNAQ96QF7 691 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 TRIM5Q9C035 493 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 TRPV4Q9HBA0 871 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 CDH22Q9UJ99 828 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 CDH7Q9ULB5 785 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 BZW2Q9Y6E2 419 aaKnown RBP12.57□□□□□ -0.4
ATG4B-207ENST00000415107 UNC80Q8N2C7 3258 aa12.57□□□□□ -0.4
ATG4B-207ENST00000415107 NUP210Q8TEM1 1887 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-207ENST00000415107 MYH10P35580 1976 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 DOCK6Q96HP0 2047 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 SART1O43290 800 aaKnown RBP12.56□□□□□ -0.4
ATG4B-207ENST00000415107 GFPT2O94808 682 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 CYP1A1P04798 512 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-207ENST00000415107 CDC25BP30305 580 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 KRT9P35527 623 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 KCNQ1P51787 676 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 ZNF75DP51815 510 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 FMO1Q01740 532 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 ZP2Q05996 745 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 TBX2Q13207 712 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-207ENST00000415107 PDCLQ13371 301 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 PPP1R2P3Q6NXS1 205 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 PMF1Q6P1K2 205 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 KLHDC10Q6PID8 442 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 BEND5Q7L4P6 421 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 GPRIN1Q7Z2K8 1008 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 DRC7Q8IY82 874 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 KIAA1958Q8N8K9 716 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 OLIG1Q8TAK6 271 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 IRGQQ8WZA9 623 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 FGF13Q92913 245 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 NXPE3Q969Y0 559 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 ACSF2Q96CM8 615 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-207ENST00000415107 NOX5Q96PH1 765 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 DNAJC7Q99615 494 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 APOL5Q9BWW9 433 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 TASP1Q9H6P5 420 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 CLIC5Q9NZA1 410 aa12.56□□□□□ -0.4
ATG4B-207ENST00000415107 LUC7L2Q9Y383 392 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms