RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PBX2P40425 430 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
SHMT2-202ENST00000414700 PSMD5Q16401 504 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 KIAA1841Q6NSI8 718 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 DDX53Q86TM3 631 aaKnown RBP16.35■□□□□ 0.21
SHMT2-202ENST00000414700 RFFLQ8WZ73 363 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 PNKPQ96T60 521 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 DNAI2Q9GZS0 605 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 ABCB6Q9NP58 842 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 ALG13Q9NP73 1137 aaKnown RBP16.35■□□□□ 0.21
SHMT2-202ENST00000414700 AAASQ9NRG9 546 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 ABI2Q9NYB9 513 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-202ENST00000414700 EYSQ5T1H1 3165 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 VNN2O95498 520 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 CYP1A2P05177 515 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 TUBBP07437 444 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 CYP2F1P24903 491 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 CTNNB1P35222 781 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 NAP1L1P55209 391 aaKnown RBP16.35■□□□□ 0.21
SHMT2-202ENST00000414700 SWT1Q5T5J6 900 aaKnown RBP16.35■□□□□ 0.21
SHMT2-202ENST00000414700 PIGZQ86VD9 579 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 ATAD1Q8NBU5 361 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 FBXO22Q8NEZ5 403 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 PIK3R5Q8WYR1 880 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 BTBD6Q96KE9 485 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 FAM107BQ9H098 131 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 FAM200BP0CF97 657 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 CPB1P15086 417 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 BMPR1AP36894 532 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 GLUD2P49448 558 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 DSG1Q02413 1049 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 ZNF569Q5MCW4 686 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 RNF19BQ6ZMZ0 732 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 GPRIN1Q7Z2K8 1008 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 XYLT1Q86Y38 959 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 C18orf8Q96DM3 657 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 SMARCD1Q96GM5 515 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 VCPIP1Q96JH7 1222 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 CLSTN3Q9BQT9 956 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 NUP85Q9BW27 656 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 SLC4A5Q9BY07 1137 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 CRISPLD1Q9H336 500 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 CTTNBP2NLQ9P2B4 639 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 MTRRQ9UBK8 725 aa16.34■□□□□ 0.21
SHMT2-202ENST00000414700 YBX2Q9Y2T7 364 aaKnown RBP16.34■□□□□ 0.21
SHMT2-202ENST00000414700 TCRBV5S1A1TA0A578 114 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 WDR27A2RRH5 827 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 OR6C75A6NL08 312 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 BTNL10A8MVZ5 291 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 SETSIPP0DME0 302 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 OR1D2P34982 312 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 ROR1Q01973 937 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 MAMLD1Q13495 774 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 CASP8Q14790 479 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 MAPRE1Q15691 268 aaKnown RBP16.33■□□□□ 0.21
SHMT2-202ENST00000414700 PTPROQ16827 1216 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 SPATA2LQ8IUW3 424 aaPredicted RBP16.33■□□□□ 0.21
SHMT2-202ENST00000414700 SCUBE3Q8IX30 993 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 SLC35F6Q8N357 371 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 STKLD1Q8NE28 680 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 CLEC4CQ8WTT0 213 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 HERC2P3Q9BVR0 1158 aa16.33■□□□□ 0.21
SHMT2-202ENST00000414700 A0A0A6YYK5 440 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-202ENST00000414700 F8VP50 259 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 H7C4K7 107 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 XPO1O14980 1071 aaKnown RBP16.33■□□□□ 0.2
SHMT2-202ENST00000414700 KIF5CO60282 957 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 SOAT2O75908 522 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 CALB1P05937 261 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 DNAJB1P25685 340 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 GABRB2P47870 512 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 RPL7AP62424 266 aaKnown RBP16.33■□□□□ 0.2
SHMT2-202ENST00000414700 KRT17Q04695 432 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 PLEKHA7Q6IQ23 1121 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 CCDC91Q7Z6B0 441 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 TADA2BQ86TJ2 420 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 TMEM110Q86TL2 294 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 DCP1BQ8IZD4 617 aaKnown RBP16.33■□□□□ 0.2
SHMT2-202ENST00000414700 NOX5Q96PH1 765 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 MIS12Q9H081 205 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 CSNK1G1Q9HCP0 422 aa16.33■□□□□ 0.2
SHMT2-202ENST00000414700 PATJQ8NI35 1801 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 A0A087WUV0 522 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-202ENST00000414700 GRID2IPA4D2P6 1211 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 MTMR11A4FU01 709 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 GOLGA8SH3BPF8 625 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-202ENST00000414700 MYBL1P10243 752 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 LCP1P13796 627 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 GPR15P49685 360 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 NDUFV1P49821 464 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 GPR17Q13304 367 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 SLC8B1Q6J4K2 584 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 FAM183BPQ6ZVS7 135 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 CPNE8Q86YQ8 564 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 TPCN2Q8NHX9 752 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 ZNF564Q8TBZ8 553 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-202ENST00000414700 STK32AQ8WU08 396 aa16.32■□□□□ 0.2
SHMT2-202ENST00000414700 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms