RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CTXN3Q4LDR2 81 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 SLC8B1Q6J4K2 584 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 KIAA1841Q6NSI8 718 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 ACOT1Q86TX2 421 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 SLC47A2Q86VL8 602 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 IFT20Q8IY31 132 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 SYCE1Q8N0S2 351 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 ACTRT1Q8TDG2 376 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 TFAP2BQ92481 460 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 DDX1Q92499 740 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 TMEM209Q96SK2 561 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 LPIN3Q9BQK8 851 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 CLSTN3Q9BQT9 956 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 OXCT2Q9BYC2 517 aaPredicted RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 CERS4Q9HA82 394 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 RXFP1Q9HBX9 757 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 NOCTQ9UK39 431 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 KIAA1257Q9ULG3 409 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 MYBPHLA2RUH7 354 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 GOLGA6BA6NDN3 693 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 OR6C75A6NL08 312 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 FSCN2O14926 492 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 HEXIM1O94992 359 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 CALCAP01258 141 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 TMEM253P0C7T8 217 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 CYP11B1P15538 503 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 BPIFB4P59827 614 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 NNTQ13423 1086 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 PSMD5Q16401 504 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 INTS6LQ5JSJ4 861 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 ZNF280DQ6N043 979 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 PEX26Q7Z412 305 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 MRPL43Q8N983 215 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 C12orf29Q8N999 325 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 B3GALNT2Q8NCR0 500 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 MYCBPAPQ8TBZ2 947 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 ZNF606Q8WXB4 792 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 AUTS2Q8WXX7 1259 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 ARNTL2Q8WYA1 636 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 RFFLQ8WZ73 363 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 TNIP3Q96KP6 325 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 HEXIM2Q96MH2 286 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 KRT12Q99456 494 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 SYT15Q9BQS2 421 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 ZCWPW1Q9H0M4 648 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 FAM204AQ9H8W3 233 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 TLR9Q9NR96 1032 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 MRPL17Q9NRX2 175 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 FNIP2Q9P278 1114 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 GTF3C4Q9UKN8 822 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 ZSCAN5CA6NGD5 496 aaPredicted RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 PGRMC1O00264 195 aaKnown RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 C2CD2LO14523 706 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 ADAM12O43184 909 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 LPXNO60711 386 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 CXCL14O95715 111 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 URODP06132 367 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 VDRP11473 427 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 MLLT3P42568 568 aaPredicted RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 RNASE9P60153 205 aaKnown RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 PSMC1P62191 440 aaKnown RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 GPR17Q13304 367 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 CCDC142Q17RM4 750 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 PAQR9Q6ZVX9 377 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 TMC7Q7Z402 723 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 DAAM2Q86T65 1068 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 NOP9Q86U38 636 aaKnown RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 NT5DC3Q86UY8 548 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 GPATCH11Q8N954 259 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 EPS8L1Q8TE68 723 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 CTNNBL1Q8WYA6 563 aaPredicted RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 CALR3Q96L12 384 aaKnown RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 ZNF576Q9H609 170 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 NGRNQ9NPE2 291 aaKnown RBP10.49□□□□□ -0.73
DDB1-202ENST00000414411 TMLHEQ9NVH6 421 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 SSX2IPQ9Y2D8 614 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 CDY1Q9Y6F8 540 aa10.49□□□□□ -0.73
DDB1-202ENST00000414411 C2orf71A6NGG8 1288 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 HIDE1A8MVS5 230 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 TMCO5BA8MYB1 307 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 RAD51CO43502 376 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 CEP104O60308 925 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 ABLIM3O94929 683 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 CNPP09543 421 aaKnown RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 OR4Q2P0C623 313 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 CHRNB2P17787 502 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 RPL17P18621 184 aaKnown RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 GNA15P30679 374 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 IRS1P35568 1242 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 CARSP49589 748 aaKnown RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 TSPY1Q01534 308 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 GUCY2DQ02846 1103 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 DSG2Q14126 1118 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 CNGA2Q16280 664 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 PTPROQ16827 1216 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 PPP1R26Q5T8A7 1209 aaPredicted RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 ARHGAP17Q68EM7 881 aa10.48□□□□□ -0.73
DDB1-202ENST00000414411 PDE12Q6L8Q7 609 aaKnown RBP10.48□□□□□ -0.73
DDB1-202ENST00000414411 PALB2Q86YC2 1186 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms