RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PRKCZQ05513 592 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 RNASELQ05823 741 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 EGR3Q06889 387 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 GRB10Q13322 594 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SNW1Q13573 536 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CYLC2Q14093 348 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 KRT32Q14532 448 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PUM1Q14671 1186 aaKnown RBP eCLIP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 WDR43Q15061 677 aaKnown RBP eCLIP3.85□□□□□ -1.795e-8■■□□□ 13.9
SF3B1-203ENST00000414174 SNCBQ16143 134 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CCDC57Q2TAC2 916 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 C2orf76Q3KRA6 126 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 LRIT3Q3SXY7 679 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CEP78Q5JTW2 689 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CYP4A22Q5TCH4 519 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 OVOS1Q6IE37 1185 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PKN3Q6P5Z2 889 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SHQ1Q6PI26 577 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CLEC2AQ6UVW9 174 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 LRIG3Q6UXM1 1119 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 NLRP9Q7RTR0 991 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 STK32CQ86UX6 486 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CMTR2Q8IYT2 770 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 LILRA2Q8N149 483 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SYT2Q8N9I0 419 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ZBTB38Q8NAP3 1195 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 C7orf57Q8NEG2 295 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CEP70Q8NHQ1 597 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 B4GALNT2Q8NHY0 566 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SLC35G2Q8TBE7 412 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SLC26A7Q8TE54 656 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 RFFLQ8WZ73 363 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 LZICQ8WZA0 190 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 LPIN2Q92539 896 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ATP6V0A1Q93050 837 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PPP2R3CQ969Q6 453 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 FAM149B1Q96BN6 582 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 HSPBAP1Q96EW2 488 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 RIPOR3Q96MK2 946 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 TCEANC2Q96MN5 208 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 C7orf26Q96N11 449 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 YME1L1Q96TA2 773 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 TBCBQ99426 244 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CGREF1Q99674 301 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 COQ7Q99807 217 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 CITED2Q99967 270 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 G6PC3Q9BUM1 346 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SPATA9Q9BWV2 254 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 LSG1Q9H089 658 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 RNF32Q9H0A6 362 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SMOC1Q9H4F8 434 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 STN1Q9H668 368 aaKnown RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 HAUS4Q9H6D7 363 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 TASP1Q9H6P5 420 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 C19orf44Q9H6X5 657 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PCDH18Q9HCL0 1135 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SLC39A1Q9NY26 324 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.85□□□□□ -1.798e-19■□□□□ 8
SF3B1-203ENST00000414174 CDC23Q9UJX2 597 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PSME2Q9UL46 239 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 SATB2Q9UPW6 733 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 EXOC6BQ9Y2D4 811 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 PCDHB14Q9Y5E9 798 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 USP19O94966 1318 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 MYPNQ86TC9 1320 aa3.85□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF335Q9H4Z2 1342 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 RSF1Q96T23 1441 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-203ENST00000414174 A0A1W2PPL8 197 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PI4KAP2A4QPH2 592 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 TARM1B6A8C7 271 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 APOL1O14791 398 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 RGS13O14921 159 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 LSM1O15116 133 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 IRAK2O43187 625 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PEX1O43933 1283 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CIDEAO60543 219 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CBFA2T3O75081 653 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ZC3H11AO75152 810 aaKnown RBP eCLIP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 FGF18O76093 207 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 FSBPO95073 299 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ATE1O95260 518 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CAVIN2O95810 425 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 GALTP07902 379 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 QDPRP09417 244 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ALADP13716 330 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PORP16435 677 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 BPIP17213 487 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ABCB4P21439 1286 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CCND1P24385 295 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 ACAT1P24752 427 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CNTFP26441 200 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PTGS2P35354 604 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 PPARGP37231 505 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 RARSP54136 660 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 EIF6P56537 245 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 RNASE9P60153 205 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 UBE2IP63279 158 aaKnown RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 CSNK2BP67870 215 aa3.84□□□□□ -1.79
SF3B1-203ENST00000414174 IFI35P80217 286 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-203ENST00000414174 TFAP4Q01664 338 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms