RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 CNGA2Q16280 664 aa10.21□□□□□ -0.77
SMPD4-203ENST00000412570 TRNP1Q6NT89 227 aa10.21□□□□□ -0.77
SMPD4-203ENST00000412570 FAM35AQ86V20 835 aa10.21□□□□□ -0.77
SMPD4-203ENST00000412570 MAGOHBQ96A72 148 aaKnown RBP10.21□□□□□ -0.77
SMPD4-203ENST00000412570 TMEM169Q96HH4 297 aa10.21□□□□□ -0.77
SMPD4-203ENST00000412570 SMPD4Q9NXE4 827 aa10.21□□□□□ -0.77
SMPD4-203ENST00000412570 ADAM28Q9UKQ2 775 aa10.21□□□□□ -0.77
SMPD4-203ENST00000412570 IRF1P10914 325 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 IL1R2P27930 398 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 ZNF132P52740 706 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 ZNF252P-AS1Q0IIN9 211 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 THEM5Q8N1Q8 247 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 EPB41L5Q9HCM4 733 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 TMEM161AQ9NX61 479 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 R3HDM2Q9Y2K5 976 aaKnown RBP10.21□□□□□ -0.78
SMPD4-203ENST00000412570 SDK1Q7Z5N4 2213 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 BRWD1Q9NSI6 2320 aa10.21□□□□□ -0.78
SMPD4-203ENST00000412570 SPTBN5Q9NRC6 3674 aaKnown RBP10.21□□□□□ -0.78
SMPD4-203ENST00000412570 GOLGA8MH3BSY2 632 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 M0QYT0 321 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 TRDMT1O14717 391 aaKnown RBP10.2□□□□□ -0.78
SMPD4-203ENST00000412570 TADA3O75528 432 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CALB1P05937 261 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 SDC4P31431 198 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 PNPLA4P41247 253 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 SULT1E1P49888 294 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CDH6P55285 790 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 VSNL1P62760 191 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 KRT81Q14533 505 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 FUT10Q6P4F1 479 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 MFSD7Q6UXD7 560 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 LEKR1Q6ZMV7 388 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CLEC20AQ6ZU45 233 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 ZNF598Q86UK7 904 aaKnown RBP10.2□□□□□ -0.78
SMPD4-203ENST00000412570 RFX6Q8HWS3 928 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 RNF10Q8N5U6 811 aaKnown RBP10.2□□□□□ -0.78
SMPD4-203ENST00000412570 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.2□□□□□ -0.78
SMPD4-203ENST00000412570 PWWP2AQ96N64 755 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 SMOQ99835 787 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.2□□□□□ -0.781e-6■■■□□ 15.9
SMPD4-203ENST00000412570 CYP3A43Q9HB55 503 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 MRPL47Q9HD33 250 aaKnown RBP10.2□□□□□ -0.78
SMPD4-203ENST00000412570 ETS1P14921 441 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 DHX9Q08211 1270 aaKnown RBP10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CA9Q16790 459 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 TMC7Q7Z402 723 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 SYCE1Q8N0S2 351 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CASD1Q96PB1 797 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CYP4F11Q9HBI6 524 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 SEPT10Q9P0V9 454 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 MFHAS1Q9Y4C4 1052 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 GALTP07902 379 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 ZSCAN5DPP0CG00 497 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 MIPP30301 263 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 PAQR9Q6ZVX9 377 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 NPAS4Q8IUM7 802 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 COLGALT2Q8IYK4 626 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 ZNF710Q8N1W2 664 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CEP112Q8N8E3 955 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 RTP3Q9BQQ7 232 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CRISPLD1Q9H336 500 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 CHST7Q9NS84 486 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 PIH1D1Q9NWS0 290 aaKnown RBP10.2□□□□□ -0.78
SMPD4-203ENST00000412570 SNX24Q9Y343 169 aa10.2□□□□□ -0.78
SMPD4-203ENST00000412570 PIAS1O75925 651 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 HEXIM1O94992 359 aaKnown RBP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 MYBL2P10244 700 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 TCP1P17987 556 aaKnown RBP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 RWDD2BP57060 319 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 BST2Q10589 180 aaKnown RBP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 C10orf76Q5T2E6 689 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 FAXCQ5TGI0 409 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 RNF19BQ6ZMZ0 732 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 FAM161BQ96MY7 647 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 TRPC7Q9HCX4 862 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 DDIT4Q9NX09 232 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 PGRMC1O00264 195 aaKnown RBP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 RAD51CO43502 376 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 ZRANB2O95218 330 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 CYP1A2P05177 515 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 NPR3P17342 541 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 PPP1R7Q15435 360 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 PLPP4Q5VZY2 271 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 BSPRYQ5W0U4 402 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 RWDD4Q6NW29 188 aaKnown RBP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 DCLRE1AQ6PJP8 1040 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 LCLAT1Q6UWP7 414 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 VPS52Q8N1B4 723 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 UBR7Q8N806 425 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 SLC43A3Q8NBI5 491 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 DEPDC1BQ8WUY9 529 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 TBCBQ99426 244 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 FAM204AQ9H8W3 233 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 TBX21Q9UL17 535 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 NFU1Q9UMS0 254 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 RFXAPO00287 272 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 DAPK3O43293 454 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 TLL1O43897 1013 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 PRPSAP2O60256 369 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms