RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 REXO1L1PQ8IX06 675 aa21.3■■□□□ 1
PTPA-208ENST00000411917 MRPL38Q96DV4 380 aaKnown RBP21.3■■□□□ 1
PTPA-208ENST00000411917 C11orf70Q9BRQ4 267 aa21.3■■□□□ 1
PTPA-208ENST00000411917 TRIM62Q9BVG3 475 aa21.3■■□□□ 1
PTPA-208ENST00000411917 THAP2Q9H0W7 228 aa21.3■■□□□ 1
PTPA-208ENST00000411917 FBXO44Q9H4M3 255 aa21.3■■□□□ 1
PTPA-208ENST00000411917 PLEKHA4Q9H4M7 779 aa21.3■■□□□ 1
PTPA-208ENST00000411917 ASB3Q9Y575 518 aa21.3■■□□□ 1
PTPA-208ENST00000411917 TMCO5BA8MYB1 307 aa21.29■■□□□ 1
PTPA-208ENST00000411917 E5RJQ4 531 aa21.29■■□□□ 1
PTPA-208ENST00000411917 TULP2O00295 520 aa21.29■■□□□ 1
PTPA-208ENST00000411917 RTN3O95197 1032 aaPredicted RBP21.29■■□□□ 1
PTPA-208ENST00000411917 GLUD1P00367 558 aa21.29■■□□□ 1
PTPA-208ENST00000411917 ERBB2P04626 1255 aa21.29■■□□□ 1
PTPA-208ENST00000411917 ARHGAP25P42331 645 aa21.29■■□□□ 1
PTPA-208ENST00000411917 CLCN4P51793 760 aa21.29■■□□□ 1
PTPA-208ENST00000411917 ARPP19P56211 112 aa21.29■■□□□ 1
PTPA-208ENST00000411917 DUSP4Q13115 394 aa21.29■■□□□ 1
PTPA-208ENST00000411917 IFI16Q16666 785 aaKnown RBP21.29■■□□□ 1
PTPA-208ENST00000411917 PPP1R15BQ5SWA1 713 aa21.29■■□□□ 1
PTPA-208ENST00000411917 PLPP4Q5VZY2 271 aa21.29■■□□□ 1
PTPA-208ENST00000411917 ELMSAN1Q6PJG2 1045 aa21.29■■□□□ 1
PTPA-208ENST00000411917 SLC26A9Q7LBE3 791 aa21.29■■□□□ 1
PTPA-208ENST00000411917 FNIP1Q8TF40 1166 aa21.29■■□□□ 1
PTPA-208ENST00000411917 AUTS2Q8WXX7 1259 aa21.29■■□□□ 1
PTPA-208ENST00000411917 ARNTL2Q8WYA1 636 aa21.29■■□□□ 1
PTPA-208ENST00000411917 PPP2R3CQ969Q6 453 aa21.29■■□□□ 1
PTPA-208ENST00000411917 ZNF653Q96CK0 615 aa21.29■■□□□ 1
PTPA-208ENST00000411917 KCNK16Q96T55 309 aa21.29■■□□□ 1
PTPA-208ENST00000411917 TTLL2Q9BWV7 592 aa21.29■■□□□ 1
PTPA-208ENST00000411917 PACSIN1Q9BY11 444 aa21.29■■□□□ 1
PTPA-208ENST00000411917 LACRTQ9GZZ8 138 aa21.29■■□□□ 1
PTPA-208ENST00000411917 SYNCQ9H7C4 482 aa21.29■■□□□ 1
PTPA-208ENST00000411917 LRRC4Q9HBW1 653 aa21.29■■□□□ 1
PTPA-208ENST00000411917 TMEM51Q9NW97 253 aa21.29■■□□□ 1
PTPA-208ENST00000411917 MYO1AQ9UBC5 1043 aa21.29■■□□□ 1
PTPA-208ENST00000411917 CNOT8Q9UFF9 292 aaKnown RBP21.29■■□□□ 1
PTPA-208ENST00000411917 MTUS1Q9ULD2 1270 aa21.29■■□□□ 1
PTPA-208ENST00000411917 PATJQ8NI35 1801 aa21.29■■□□□ 1
PTPA-208ENST00000411917 RCCD1A6NED2 376 aa21.28■■□□□ 1
PTPA-208ENST00000411917 HIDE1A8MVS5 230 aa21.28■■□□□ 1
PTPA-208ENST00000411917 TGM5O43548 720 aa21.28■■□□□ 1
PTPA-208ENST00000411917 GABBR2O75899 941 aa21.28■■□□□ 1
PTPA-208ENST00000411917 TUBB4AP04350 444 aa21.28■■□□□ 1
PTPA-208ENST00000411917 RRM1P23921 792 aa21.28■■□□□ 1
PTPA-208ENST00000411917 KLRC2P26717 231 aa21.28■■□□□ 1
PTPA-208ENST00000411917 ELF1P32519 619 aa21.28■■□□□ 1
PTPA-208ENST00000411917 SSTR3P32745 418 aaPredicted RBP21.28■■□□□ 1
PTPA-208ENST00000411917 MAMLD1Q13495 774 aa21.28■■□□□ 1
PTPA-208ENST00000411917 ARHGAP29Q52LW3 1261 aa21.28■■□□□ 1
PTPA-208ENST00000411917 EFHC1Q5JVL4 640 aa21.28■■□□□ 1
PTPA-208ENST00000411917 OLFML1Q6UWY5 402 aa21.28■■□□□ 1
PTPA-208ENST00000411917 NUP93Q8N1F7 819 aa21.28■■□□□ 1
PTPA-208ENST00000411917 SIX6OS1Q8N1H7 587 aa21.28■■□□□ 1
PTPA-208ENST00000411917 OVCA2Q8WZ82 227 aa21.28■■□□□ 1
PTPA-208ENST00000411917 PGLYRP2Q96PD5 576 aa21.28■■□□□ 1
PTPA-208ENST00000411917 CRISPLD1Q9H336 500 aa21.28■■□□□ 1
PTPA-208ENST00000411917 CHD7Q9P2D1 2997 aa21.27■■□□□ 1
PTPA-208ENST00000411917 SIGLEC16A6NMB1 481 aa21.27■■□□□ 1
PTPA-208ENST00000411917 PAPSS1O43252 624 aaPredicted RBP21.27■■□□□ 1
PTPA-208ENST00000411917 POU3F3P20264 500 aaPredicted RBP21.27■■□□□ 1
PTPA-208ENST00000411917 IRS1P35568 1242 aa21.27■■□□□ 1
PTPA-208ENST00000411917 SLC5A3P53794 718 aa21.27■■□□□ 1
PTPA-208ENST00000411917 MRPS5P82675 430 aaKnown RBP21.27■■□□□ 1
PTPA-208ENST00000411917 SLC6A3Q01959 620 aa21.27■■□□□ 1
PTPA-208ENST00000411917 MGAT5BQ3V5L5 792 aa21.27■■□□□ 1
PTPA-208ENST00000411917 SLC22A17Q8WUG5 538 aa21.27■■□□□ 1
PTPA-208ENST00000411917 TRMT2BQ96GJ1 504 aaKnown RBP21.27■■□□□ 1
PTPA-208ENST00000411917 MYRFLQ96LU7 910 aa21.27■■□□□ 1
PTPA-208ENST00000411917 RHOBTB2Q9BYZ6 727 aa21.27■■□□□ 1
PTPA-208ENST00000411917 ZNF576Q9H609 170 aa21.27■■□□□ 1
PTPA-208ENST00000411917 ST7Q9NRC1 585 aa21.27■■□□□ 1
PTPA-208ENST00000411917 SCML2Q9UQR0 700 aa21.27■■□□□ 1
PTPA-208ENST00000411917 YIPF1Q9Y548 306 aa21.27■■□□□ 1
PTPA-208ENST00000411917 COL4A4P53420 1690 aaPredicted RBP21.27■■□□□ 1
PTPA-208ENST00000411917 LAMA3Q16787 3333 aa21.27■□□□□ 0.99
PTPA-208ENST00000411917 CLASP2O75122 1294 aaKnown RBP21.26■□□□□ 0.99
PTPA-208ENST00000411917 SEC24AO95486 1093 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 ZBED1O96006 694 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 CSH1P0DML2 217 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 CSH2P0DML3 217 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 ABCB4P21439 1286 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 TKTL1P51854 596 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 DNAJC24Q6P3W2 148 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 DENND5BQ6ZUT9 1274 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 MICAL1Q8TDZ2 1067 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 CYP4F11Q9HBI6 524 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 COLQQ9Y215 455 aaPredicted RBP21.26■□□□□ 0.99
PTPA-208ENST00000411917 INSL5Q9Y5Q6 135 aa21.26■□□□□ 0.99
PTPA-208ENST00000411917 EPOPA6NHQ4 379 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 HSF2BPO75031 334 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 HNRNPA1P09651 372 aaKnown RBP eCLIP21.25■□□□□ 0.99
PTPA-208ENST00000411917 ATF6P18850 670 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 ALDH1A3P47895 512 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 PPP3CCP48454 512 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 PSEN1P49768 467 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 RGS7P49802 495 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 DAOAP59103 153 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 ADIGQ0VDE8 80 aa21.25■□□□□ 0.99
PTPA-208ENST00000411917 DUSP6Q16828 381 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms