RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 NDRG1Q92597 394 aaKnown RBP12.66□□□□□ -0.38
NEDD1-202ENST00000411739 NAT10Q9H0A0 1025 aaKnown RBP12.66□□□□□ -0.38
NEDD1-202ENST00000411739 TRPM5Q9NZQ8 1165 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 GMIPQ9P107 970 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 FBXL21Q9UKT6 434 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 DUSP12Q9UNI6 340 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 COL4A3Q01955 1670 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 ZNF840PA6NDX5 716 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 BECN2A8MW95 431 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 SCAMP3O14828 347 aaKnown RBP12.66□□□□□ -0.38
NEDD1-202ENST00000411739 ZNF18P17022 549 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 PDE4CQ08493 712 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 ARHGAP17Q68EM7 881 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 MON1AQ86VX9 555 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 USP13Q92995 863 aaPredicted RBP12.66□□□□□ -0.38
NEDD1-202ENST00000411739 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 TTLL2Q9BWV7 592 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 RNF38Q9H0F5 515 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 GTPBP10A4D1E9 387 aaKnown RBP12.65□□□□□ -0.38
NEDD1-202ENST00000411739 TMEM221A6NGB7 291 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 M0R296 226 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 O00370 1275 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 DPYSL4O14531 572 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 CYP26A1O43174 497 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 ECI2O75521 394 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 LETM1O95202 739 aaPredicted RBP12.65□□□□□ -0.38
NEDD1-202ENST00000411739 VDRP11473 427 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 PTMSP20962 102 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 GDI1P31150 447 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 AVPR1AP37288 418 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 MFAP3P55082 362 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 SIGLEC14Q08ET2 396 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 HFE2Q6ZVN8 426 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 PIGZQ86VD9 579 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 ASIC4Q96FT7 647 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 GPR88Q9GZN0 384 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 SMPD4Q9NXE4 827 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 NUDT5Q9UKK9 219 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 FHOD1Q9Y613 1164 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 ZNF638Q14966 1978 aaKnown RBP12.65□□□□□ -0.38
NEDD1-202ENST00000411739 FOXN3O00409 490 aaPredicted RBP12.65□□□□□ -0.38
NEDD1-202ENST00000411739 CKMP06732 381 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 SRFP11831 508 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 HDCP19113 662 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 RGS7P49802 495 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 ZNF132P52740 706 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 RAPGEF1Q13905 1077 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 IQCB1Q15051 598 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 SKOR2Q2VWA4 1001 aaPredicted RBP12.65□□□□□ -0.38
NEDD1-202ENST00000411739 UBALD2Q8IYN6 164 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 SIX5Q8N196 739 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 ANKRD52Q8NB46 1076 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 NXPE3Q969Y0 559 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 SLITRK1Q96PX8 696 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 DNAI2Q9GZS0 605 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 CBX8Q9HC52 389 aa12.65□□□□□ -0.38
NEDD1-202ENST00000411739 LIMA1Q9UHB6 759 aaKnown RBP12.65□□□□□ -0.38
NEDD1-202ENST00000411739 KRBA1A5PL33 1030 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 EPHB6O15197 1021 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-202ENST00000411739 ZXDBP98169 803 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 TMEM31Q5JXX7 168 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 KLHDC7AQ5VTJ3 777 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 APTXQ7Z2E3 356 aaKnown RBP12.64□□□□□ -0.39
NEDD1-202ENST00000411739 PBXIP1Q96AQ6 731 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 LRFN3Q9BTN0 628 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 TRMT61BQ9BVS5 477 aaKnown RBP12.64□□□□□ -0.39
NEDD1-202ENST00000411739 CCSER2Q9H7U1 834 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 FAM207AQ9NSI2 230 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-202ENST00000411739 OSER1Q9NX31 292 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 OBSL1O75147 1896 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 M0QYV0 167 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 TBX18O95935 607 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 PAEPP09466 180 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 USP17L7P0C7H9 530 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 PSMC3P17980 439 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 CD72P21854 359 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 UBXN1Q04323 297 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 SECISBP2LQ93073 1101 aaKnown RBP12.64□□□□□ -0.39
NEDD1-202ENST00000411739 PCMTD1Q96MG8 357 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-202ENST00000411739 BRD9Q9H8M2 597 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 NMUR1Q9HB89 426 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 TRPV4Q9HBA0 871 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 IL37Q9NZH6 218 aa12.64□□□□□ -0.39
NEDD1-202ENST00000411739 TRAV19A0A0A6YYK7 116 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 A0A1W2PQH9 124 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 STK25O00506 426 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 TEX33O43247 280 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 THAP12O43422 761 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 TPM2P07951 284 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 KIF11P52732 1056 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 TNK2Q07912 1038 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 DRAP1Q14919 205 aaPredicted RBP12.63□□□□□ -0.39
NEDD1-202ENST00000411739 SYCP1Q15431 976 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 TRIM68Q6AZZ1 485 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 DENND1BQ6P3S1 775 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 LCLAT1Q6UWP7 414 aa12.63□□□□□ -0.39
NEDD1-202ENST00000411739 MFSD6LQ8IWD5 586 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms