RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SPINK2P20155 84 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CSRP1P21291 193 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TIE1P35590 1138 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 GNL1P36915 607 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 MESP2Q0VG99 397 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TAF10Q12962 218 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 EMC10Q5UCC4 262 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TDRD10Q5VZ19 366 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 RHBDF2Q6PJF5 856 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 UNQ6494/PRO21346Q6UXR6 183 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 STXBP4Q6ZWJ1 553 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TRAPPC11Q7Z392 1133 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 WDR49Q8IV35 697 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 KIAA1958Q8N8K9 716 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 IL17RCQ8NAC3 791 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 OLIG1Q8TAK6 271 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 MRPL45Q9BRJ2 306 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 UPF2Q9HAU5 1272 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 POLMQ9NP87 494 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 HSPBP1Q9NZL4 362 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CFAP97Q9P2B7 532 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SGK1O00141 431 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 KAT7O95251 611 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 OLFM2O95897 454 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 OAS1P00973 400 aaKnown RBP15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CST3P01034 146 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 MBL2P11226 248 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 PTPN1P18031 435 aaKnown RBP15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 PDCP20941 246 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 IFRD2Q12894 506 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 RESTQ13127 1097 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ARMCX6Q7L4S7 300 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 LPCAT2Q7L5N7 544 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 C12orf40Q86WS4 652 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 PDILTQ8N807 584 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 FRMD1Q8N878 549 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 RDH13Q8NBN7 331 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 OR6B3Q8NGW1 331 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 HPS3Q969F9 1004 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SPACA7Q96KW9 195 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 KIAA1586Q9HCI6 787 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ZDHHC4Q9NPG8 344 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 BCCIPQ9P287 314 aaKnown RBP eCLIP15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 WASF3Q9UPY6 502 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 NME7Q9Y5B8 376 aa15.18■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TNRC6BQ9UPQ9 1833 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 A0A0A0MRY4 1105 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TACC1O75410 805 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TOP3BO95985 862 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ADH1CP00326 375 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 DLATP10515 647 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TNNI1P19237 187 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 HOXD13P35453 343 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 EIF2DP41214 584 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 P2RY2P41231 377 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 GRIA2P42262 883 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CACNA2D1P54289 1103 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 KDSRQ06136 332 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 HSF5Q4G112 596 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TRIM61Q5EBN2 209 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 EOGTQ5NDL2 527 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 DDX42Q86XP3 938 aaKnown RBP eCLIP15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TMEFF1Q8IYR6 380 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 PGBD3Q8N328 593 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 DEFB124Q8NES8 71 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 WHAMMQ8TF30 809 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 HMGB4Q8WW32 186 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 FNBP1Q96RU3 617 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 NUSAP1Q9BXS6 441 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ARHGEF4Q9NR80 690 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TMEM30AQ9NV96 361 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 EVLQ9UI08 416 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ZMIZ1Q9ULJ6 1067 aa15.17■□□□□ 0.02
HLA-DQB2-229ENST00000411527 MYO18AQ92614 2054 aaKnown RBP15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CHD6Q8TD26 2715 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CEP192Q8TEP8 1941 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TNFRSF10BO14763 440 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 FAM163BP0C2L3 166 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ADH5P11766 374 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 PTGER3P43115 390 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TNFRSF4P43489 277 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 KIR2DL1P43626 348 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 MAPK8P45983 427 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 LMAN2Q12907 356 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CUL4AQ13619 759 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SLC39A14Q15043 492 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SNRNP35Q16560 246 aaKnown RBP15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 WDR72Q3MJ13 1102 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SYT12Q8IV01 421 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 USP28Q96RU2 1077 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 B3GNT5Q9BYG0 378 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ZNF518BQ9C0D4 1074 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ELOVL4Q9GZR5 314 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 DPEP3Q9H4B8 488 aa15.16■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TMEM74BQ9NUR3 256 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms