RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CSTF1Q05048 431 aaKnown RBP18.79■□□□□ 0.6
LSM5-204ENST00000409909 IFRD2Q12894 506 aaPredicted RBP18.79■□□□□ 0.6
LSM5-204ENST00000409909 USP4Q13107 963 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 GAS6Q14393 721 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 MTF1Q14872 753 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 PON2Q15165 354 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 CC2D1AQ6P1N0 951 aaPredicted RBP18.79■□□□□ 0.6
LSM5-204ENST00000409909 C1orf228Q6PIY5 440 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 TTC16Q8NEE8 873 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 SH3RF2Q8TEC5 729 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 NKD2Q969F2 451 aaPredicted RBP18.79■□□□□ 0.6
LSM5-204ENST00000409909 SMARCD1Q96GM5 515 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 SMOQ99835 787 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 GTPBP4Q9BZE4 634 aaKnown RBP18.79■□□□□ 0.6
LSM5-204ENST00000409909 NIF3L1Q9GZT8 377 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 DMAP1Q9NPF5 467 aaPredicted RBP18.79■□□□□ 0.6
LSM5-204ENST00000409909 KRT82Q9NSB4 513 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 RBM12Q9NTZ6 932 aaKnown RBP18.79■□□□□ 0.6
LSM5-204ENST00000409909 FAM49BQ9NUQ9 324 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 IL37Q9NZH6 218 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 ARHGAP26Q9UNA1 814 aa18.79■□□□□ 0.6
LSM5-204ENST00000409909 EP300Q09472 2414 aaPredicted RBP18.78■□□□□ 0.6
LSM5-204ENST00000409909 SLC16A3O15427 465 aaKnown RBP18.78■□□□□ 0.6
LSM5-204ENST00000409909 CD58P19256 250 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 YWHAQP27348 245 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 PPP3CCP48454 512 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 MXI1P50539 228 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 ZNF528Q3MIS6 628 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 CBWD6Q4V339 395 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 CBWD3Q5JTY5 395 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 CBWD5Q5RIA9 395 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 TSSK4Q6SA08 328 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 MAMSTRQ6ZN01 415 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 FBXL13Q8NEE6 735 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 DHTKD1Q96HY7 919 aaPredicted RBP18.78■□□□□ 0.6
LSM5-204ENST00000409909 CSNK1G1Q9HCP0 422 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 PRMT8Q9NR22 394 aaPredicted RBP18.78■□□□□ 0.6
LSM5-204ENST00000409909 RAB20Q9NX57 234 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 HELZP42694 1942 aaKnown RBP18.78■□□□□ 0.6
LSM5-204ENST00000409909 GVINP1Q7Z2Y8 2422 aa18.78■□□□□ 0.6
LSM5-204ENST00000409909 PPP1R3GB7ZBB8 358 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 STX10O60499 249 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 CILPO75339 1184 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 RTN3O95197 1032 aaPredicted RBP18.77■□□□□ 0.6
LSM5-204ENST00000409909 OLFM2O95897 454 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 ABL1P00519 1130 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 OAS1P00973 400 aaKnown RBP18.77■□□□□ 0.6
LSM5-204ENST00000409909 TCF3P15923 654 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 PFKLP17858 780 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 SLC5A3P53794 718 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 MORC3Q14149 939 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 PDGFRLQ15198 375 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 OSCP1Q8WVF1 389 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 TATDN2Q93075 761 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 SLITRK1Q96PX8 696 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 HNRNPABQ99729 332 aaKnown RBP18.77■□□□□ 0.6
LSM5-204ENST00000409909 DUSP9Q99956 384 aaKnown RBP18.77■□□□□ 0.6
LSM5-204ENST00000409909 NT5C1AQ9BXI3 368 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 LINC00597Q9H2U6 94 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 DUS2Q9NX74 493 aaKnown RBP18.77■□□□□ 0.6
LSM5-204ENST00000409909 CHORDC1Q9UHD1 332 aaPredicted RBP18.77■□□□□ 0.6
LSM5-204ENST00000409909 WNT6Q9Y6F9 365 aa18.77■□□□□ 0.6
LSM5-204ENST00000409909 MYH10P35580 1976 aa18.77■□□□□ 0.59
LSM5-204ENST00000409909 BIN1O00499 593 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 PSMA7O14818 248 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 TDGF1P13385 188 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 ADORA2BP29275 332 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 PGFP49763 221 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 PDE6CP51160 858 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 MAP3K7CLP57077 242 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 SLC7A9P82251 487 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 STIM1Q13586 685 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 CCINQ13939 588 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 EML3Q32P44 896 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 DCAF17Q5H9S7 520 aaPredicted RBP18.76■□□□□ 0.59
LSM5-204ENST00000409909 TCERG1LQ5VWI1 586 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 NAIF1Q69YI7 327 aaPredicted RBP18.76■□□□□ 0.59
LSM5-204ENST00000409909 Q6ZS52 159 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 CCDC150Q8NCX0 1101 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 NELL1Q92832 810 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 FBXO32Q969P5 355 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 SLC35C1Q96A29 364 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 CYFIP2Q96F07 1278 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 ARID3AQ99856 593 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 ARMCX3Q9UH62 379 aaPredicted RBP18.76■□□□□ 0.59
LSM5-204ENST00000409909 COQ4Q9Y3A0 265 aa18.76■□□□□ 0.59
LSM5-204ENST00000409909 GPR179Q6PRD1 2367 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 FAM92AA1XBS5 289 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 LEFTY2O00292 366 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 ZDHHC11BP0C7U3 371 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 LRRC32Q14392 662 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 DGKKQ5KSL6 1271 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 SNX30Q5VWJ9 437 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 KLHL10Q6JEL2 608 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 TTI2Q6NXR4 508 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 PDZD8Q8NEN9 1154 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 OVCA2Q8WZ82 227 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 IER2Q9BTL4 223 aa18.75■□□□□ 0.59
LSM5-204ENST00000409909 ECT2Q9H8V3 914 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms