RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 NCANO14594 1321 aa11.53□□□□□ -0.56
CHMP3-205ENST00000409810 TICRRQ7Z2Z1 1910 aa11.52□□□□□ -0.56
CHMP3-205ENST00000409810 TMEM221A6NGB7 291 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 HEPACAM2A8MVW5 462 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 M0R296 226 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 TNFRSF10BO14763 440 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 MED7O43513 233 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 GPR37L1O60883 481 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 BEST1O76090 585 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 ABL1P00519 1130 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 CKMP06732 381 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 USP17L7P0C7H9 530 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 SETSIPP0DME0 302 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 PSMC3P17980 439 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 FCARP24071 287 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 USP46P62068 366 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 BST2Q10589 180 aaKnown RBP11.52□□□□□ -0.57
CHMP3-205ENST00000409810 TAF10Q12962 218 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF268Q14587 947 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-205ENST00000409810 ARHGAP44Q17R89 818 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 TXNDC8Q6A555 127 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 MFSD6LQ8IWD5 586 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 CELF5Q8N6W0 485 aaKnown RBP11.52□□□□□ -0.57
CHMP3-205ENST00000409810 KREMEN1Q96MU8 473 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 FUCA2Q9BTY2 467 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 TRMT61BQ9BVS5 477 aaKnown RBP11.52□□□□□ -0.57
CHMP3-205ENST00000409810 SLC46A2Q9BY10 475 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 UBXN6Q9BZV1 441 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 VPS16Q9H269 839 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 BRD9Q9H8M2 597 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 TLR8Q9NR97 1041 aaKnown RBP11.52□□□□□ -0.57
CHMP3-205ENST00000409810 IL37Q9NZH6 218 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 WNT16Q9UBV4 365 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 DAAM1Q9Y4D1 1078 aa11.52□□□□□ -0.57
CHMP3-205ENST00000409810 KIF26AQ9ULI4 1882 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-205ENST00000409810 MIA3Q5JRA6 1907 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 FAM92AA1XBS5 289 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF840PA6NDX5 716 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 PRR33A8MZF0 331 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 O00370 1275 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 XPO1O14980 1071 aaKnown RBP11.51□□□□□ -0.57
CHMP3-205ENST00000409810 NARSO43776 548 aaKnown RBP11.51□□□□□ -0.57
CHMP3-205ENST00000409810 CFHP08603 1231 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF18P17022 549 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 HDCP19113 662 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 VIPR2P41587 438 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 TUBP50607 506 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF132P52740 706 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 COPB1P53618 953 aaKnown RBP11.51□□□□□ -0.57
CHMP3-205ENST00000409810 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 NCAPHQ15003 741 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 ZSCAN23Q3MJ62 389 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 ARHGAP29Q52LW3 1261 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 POTEHQ6S545 545 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 LCLAT1Q6UWP7 414 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 VITQ6UXI7 678 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 ST13P5Q8NFI4 369 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-205ENST00000409810 SCAMP5Q8TAC9 235 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 BPIFB1Q8TDL5 484 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 DNASE1L2Q92874 299 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 IRF7Q92985 503 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 RPP25Q9BUL9 199 aaKnown RBP11.51□□□□□ -0.57
CHMP3-205ENST00000409810 LSM14BQ9BX40 385 aaKnown RBP11.51□□□□□ -0.57
CHMP3-205ENST00000409810 MFSD1Q9H3U5 465 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 SMOC2Q9H3U7 446 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 TDP1Q9NUW8 608 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 THG1LQ9NWX6 298 aaKnown RBP11.51□□□□□ -0.57
CHMP3-205ENST00000409810 LIMA1Q9UHB6 759 aaKnown RBP11.51□□□□□ -0.57
CHMP3-205ENST00000409810 DNAJC12Q9UKB3 198 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 CNTN6Q9UQ52 1028 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 SCML2Q9UQR0 700 aa11.51□□□□□ -0.57
CHMP3-205ENST00000409810 LGALS16A8MUM7 142 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 HHLA1C9JL84 531 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 M0QYV0 167 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF263O14978 683 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 BRD2P25440 801 aaKnown RBP11.5□□□□□ -0.57
CHMP3-205ENST00000409810 GNA15P30679 374 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 GDI1P31150 447 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 USP8P40818 1118 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 PSEN1P49768 467 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 KIF11P52732 1056 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 GPC5P78333 572 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 PTK2Q05397 1052 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 FCHO2Q0JRZ9 810 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 RAPGEF1Q13905 1077 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 GRM2Q14416 872 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 CNGA2Q16280 664 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 MEA1Q16626 185 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 FILIP1LQ4L180 1135 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 HECTD3Q5T447 861 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 SNX30Q5VWJ9 437 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 CC2D1AQ6P1N0 951 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-205ENST00000409810 GJB7Q6PEY0 223 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 BMP8AQ7Z5Y6 402 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 TADA2BQ86TJ2 420 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 PIGZQ86VD9 579 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 TTC30AQ86WT1 665 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 DDX42Q86XP3 938 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHMP3-205ENST00000409810 DHX40Q8IX18 779 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms