RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 ACAP1Q15027 740 aa6.6□□□□□ -1.35
PBRM1-207ENST00000409767 SHROOM1Q2M3G4 852 aaPredicted RBP6.6□□□□□ -1.35
PBRM1-207ENST00000409767 PUS10Q3MIT2 529 aaKnown RBP6.6□□□□□ -1.35
PBRM1-207ENST00000409767 TSHZ1Q6ZSZ6 1077 aa6.6□□□□□ -1.35
PBRM1-207ENST00000409767 TMEM117Q9H0C3 514 aa6.6□□□□□ -1.35
PBRM1-207ENST00000409767 STN1Q9H668 368 aaKnown RBP6.6□□□□□ -1.35
PBRM1-207ENST00000409767 METTL5Q9NRN9 209 aaKnown RBP6.6□□□□□ -1.35
PBRM1-207ENST00000409767 SNX12Q9UMY4 172 aa6.6□□□□□ -1.35
PBRM1-207ENST00000409767 TARSL2A2RTX5 802 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 MAP4P27816 1152 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 CCR1P32246 355 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 GRIK3Q13003 919 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 TBCCQ15814 346 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 AARS2Q5JTZ9 985 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 TTC19Q6DKK2 380 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 PHLDB3Q6NSJ2 640 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SLFN11Q7Z7L1 901 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 TBC1D1Q86TI0 1168 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 RBM23Q86U06 439 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 ZC3H18Q86VM9 953 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 CRLF3Q8IUI8 442 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SKA1Q96BD8 255 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 CHMP6Q96FZ7 201 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 CYTH2Q99418 400 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 CARD9Q9H257 536 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 FAM124BQ9H5Z6 455 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 XAB2Q9HCS7 855 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 NDFIP2Q9NV92 336 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 EPS15L1Q9UBC2 864 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SLC13A4Q9UKG4 626 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 AAR2Q9Y312 384 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 A0A0A6YYK5 440 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SLC12A8A0AV02 714 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 EML1O00423 815 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 NDUFS3O75489 264 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 ZWINTO95229 277 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 PDIA2Q13087 525 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 ZNF211Q13398 564 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 PTK6Q13882 451 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 BYSLQ13895 437 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 PLPP4Q5VZY2 271 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 LLGL2Q6P1M3 1020 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 DCLRE1AQ6PJP8 1040 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SLC9A9Q8IVB4 645 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 TAS1R2Q8TE23 839 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 C18orf25Q96B23 403 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 GPR20Q99678 358 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 ZFATQ9P243 1243 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 THEGQ9P2T0 379 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 PLA2G4CQ9UP65 541 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 PKP3Q9Y446 797 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 NR2E1Q9Y466 385 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SCN4AP35499 1836 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 OR6C75A6NL08 312 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 LACTBL1A8MY62 500 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 FOXN3O00409 490 aaPredicted RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 NVLO15381 856 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SYNCRIPO60506 623 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 AKAP3O75969 853 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 RECQL4O94761 1208 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 HSPA4LO95757 839 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 ASS1P00966 412 aaKnown RBP6.59□□□□□ -1.35
PBRM1-207ENST00000409767 HDAC4P56524 1084 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 USP41Q3LFD5 358 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SYTL3Q4VX76 610 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 MDH1BQ5I0G3 518 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 NT5DC1Q5TFE4 455 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 DSG4Q86SJ6 1040 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 LRGUKQ96M69 825 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 EGFL8Q99944 293 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 NAT9Q9BTE0 207 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 EFHD1Q9BUP0 239 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 SEMA6BQ9H3T3 888 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 AGPAT5Q9NUQ2 364 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 GTF2IRD1Q9UHL9 959 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 ALG6Q9Y672 507 aa6.59□□□□□ -1.35
PBRM1-207ENST00000409767 PITPNM1O00562 1244 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 CKBP12277 381 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 MYL4P12829 197 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 GRM5P41594 1212 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 PMS2P54278 862 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 TSNAXIP1Q2TAA8 658 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 RBM43Q6ZSC3 357 aaKnown RBP6.59□□□□□ -1.36
PBRM1-207ENST00000409767 RASSF3Q86WH2 238 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 PPM1NQ8N819 430 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 CCDC197Q8NCU1 140 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 SPATA18Q8TC71 538 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 DIS3LQ8TF46 1054 aaKnown RBP6.59□□□□□ -1.36
PBRM1-207ENST00000409767 GPR63Q9BZJ6 419 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 CDH9Q9ULB4 789 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 TPX2Q9ULW0 747 aaKnown RBP6.59□□□□□ -1.36
PBRM1-207ENST00000409767 ST3GAL5Q9UNP4 418 aa6.59□□□□□ -1.36
PBRM1-207ENST00000409767 UBR2Q8IWV8 1755 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 UBA6A0AVT1 1052 aaPredicted RBP6.58□□□□□ -1.36
PBRM1-207ENST00000409767 ACSL3O95573 720 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 RB1P06400 928 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 CSH1P0DML2 217 aa6.58□□□□□ -1.36
PBRM1-207ENST00000409767 CSH2P0DML3 217 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms