RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 LPPQ93052 612 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 NKD2Q969F2 451 aaPredicted RBP21.7■■□□□ 1.06
USP39-203ENST00000409470 PEBP4Q96S96 227 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 OTUD4Q01804 1114 aaKnown RBP21.69■■□□□ 1.06
USP39-203ENST00000409470 OASLQ15646 514 aaKnown RBP21.69■■□□□ 1.06
USP39-203ENST00000409470 P3H1Q32P28 736 aa21.69■■□□□ 1.06
USP39-203ENST00000409470 SCYL2Q6P3W7 929 aa21.69■■□□□ 1.06
USP39-203ENST00000409470 TRMT10CQ7L0Y3 403 aaKnown RBP21.69■■□□□ 1.06
USP39-203ENST00000409470 RPAINQ86UA6 219 aa21.69■■□□□ 1.06
USP39-203ENST00000409470 OSTM1Q86WC4 334 aa21.69■■□□□ 1.06
USP39-203ENST00000409470 KLHDC9Q8NEP7 349 aa21.69■■□□□ 1.06
USP39-203ENST00000409470 UHMK1Q8TAS1 419 aaKnown RBP21.69■■□□□ 1.06
USP39-203ENST00000409470 PKNOX2Q96KN3 472 aa21.69■■□□□ 1.06
USP39-203ENST00000409470 TSPYL2Q9H2G4 693 aaPredicted RBP21.69■■□□□ 1.06
USP39-203ENST00000409470 NGRNQ9NPE2 291 aaKnown RBP21.69■■□□□ 1.06
USP39-203ENST00000409470 AAASQ9NRG9 546 aa21.69■■□□□ 1.06
USP39-203ENST00000409470 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.69■■□□□ 1.06
USP39-203ENST00000409470 RNF186Q9NXI6 227 aa21.69■■□□□ 1.06
USP39-203ENST00000409470 SAE1Q9UBE0 346 aaPredicted RBP21.69■■□□□ 1.06
USP39-203ENST00000409470 SGK1O00141 431 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 DPYSL4O14531 572 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 GABBR2O75899 941 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 ITGAVP06756 1048 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 THP07101 528 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 LCP1P13796 627 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 HPDP32754 393 aaPredicted RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 ARSEP51690 589 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 RAB6CQ53S08 254 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 B3GALNT2Q8NCR0 500 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 ACTL9Q8TC94 416 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 MAK16Q9BXY0 300 aaKnown RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 FRMD8P1Q9BZ68 369 aaPredicted RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 RAB6CQ9H0N0 254 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 AGO3Q9H9G7 860 aaKnown RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 RSAD1Q9HA92 442 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 SHOX2O60902 331 aaPredicted RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 ZSCAN5DPP0CG00 497 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 CDH6P55285 790 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 UBAP2Q5T6F2 1119 aaKnown RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 GLIS1Q8NBF1 620 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 SLC35B2Q8TB61 432 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 FAM172AQ8WUF8 416 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 TMEM121Q9BTD3 319 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 CDC42EP4Q9H3Q1 356 aaKnown RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 LRRC4CQ9HCJ2 640 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 DNAJC17Q9NVM6 304 aaKnown RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 CACNG4Q9UBN1 327 aa21.68■■□□□ 1.06
USP39-203ENST00000409470 NOVA2Q9UNW9 492 aaKnown RBP21.68■■□□□ 1.06
USP39-203ENST00000409470 ETS1P14921 441 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 CD52P31358 61 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 GNGT1P63211 74 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 WSCD1Q658N2 575 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 PCSK9Q8NBP7 692 aaKnown RBP21.67■■□□□ 1.06
USP39-203ENST00000409470 GSTCDQ8NEC7 633 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 KHSRPQ92945 711 aaKnown RBP eCLIP21.67■■□□□ 1.06
USP39-203ENST00000409470 NOD1Q9Y239 953 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 GRIN2DO15399 1336 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 TLDC2A0PJX2 215 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 IFNB1P01574 187 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 GHRP10912 638 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 IBSPP21815 317 aaPredicted RBP21.67■■□□□ 1.06
USP39-203ENST00000409470 ACAT1P24752 427 aaKnown RBP21.67■■□□□ 1.06
USP39-203ENST00000409470 ACADSBP45954 432 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 AFF1P51825 1210 aaKnown RBP21.67■■□□□ 1.06
USP39-203ENST00000409470 GPS1Q13098 491 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 KRT81Q14533 505 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 TTC19Q6DKK2 380 aaPredicted RBP21.67■■□□□ 1.06
USP39-203ENST00000409470 ARFGAP2Q8N6H7 521 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 CLEC4CQ8WTT0 213 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 CYLDQ9NQC7 956 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 PADI3Q9ULW8 664 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 GIT1Q9Y2X7 761 aa21.67■■□□□ 1.06
USP39-203ENST00000409470 CASP8AP2Q9UKL3 1982 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 ARL5CA6NH57 179 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 SMIM23A6NLE4 172 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 A6NNZ2 444 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 ATP2C2O75185 946 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 TKTP29401 623 aaKnown RBP21.66■■□□□ 1.06
USP39-203ENST00000409470 IRAK1P51617 712 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 SLC8A3P57103 927 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 TUBB8Q3ZCM7 444 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 CCSAPQ6IQ19 270 aaPredicted RBP21.66■■□□□ 1.06
USP39-203ENST00000409470 HIBCHQ6NVY1 386 aaPredicted RBP21.66■■□□□ 1.06
USP39-203ENST00000409470 CYP4V2Q6ZWL3 525 aaPredicted RBP21.66■■□□□ 1.06
USP39-203ENST00000409470 HSFY1Q96LI6 401 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 DDX23Q9BUQ8 820 aaKnown RBP21.66■■□□□ 1.06
USP39-203ENST00000409470 MIOSQ9NXC5 875 aa21.66■■□□□ 1.06
USP39-203ENST00000409470 DNALI1O14645 258 aaPredicted RBP21.65■■□□□ 1.06
USP39-203ENST00000409470 KIF3CO14782 793 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 CAND2O75155 1236 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 ACSL3O95573 720 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 IGFBP6P24592 240 aaPredicted RBP21.65■■□□□ 1.06
USP39-203ENST00000409470 CST5P28325 142 aaPredicted RBP21.65■■□□□ 1.06
USP39-203ENST00000409470 SCNN1GP51170 649 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 MMRN1Q13201 1228 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 BOLA3Q53S33 107 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 EMC10Q5UCC4 262 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 AGMOQ6ZNB7 445 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 CROCCP2Q86T23 111 aa21.65■■□□□ 1.06
USP39-203ENST00000409470 MAP7D3Q8IWC1 876 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms