RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 FARP1Q9Y4F1 1045 aaPredicted RBP17.59■□□□□ 0.41
SYNC-202ENST00000409190 KCNN4O15554 427 aa17.58■□□□□ 0.41
SYNC-202ENST00000409190 DPYSL3Q14195 570 aa17.58■□□□□ 0.41
SYNC-202ENST00000409190 TMEM132BQ14DG7 1078 aa17.58■□□□□ 0.41
SYNC-202ENST00000409190 CTC1Q2NKJ3 1217 aa17.58■□□□□ 0.41
SYNC-202ENST00000409190 SLFN12LQ6IEE8 588 aa17.58■□□□□ 0.41
SYNC-202ENST00000409190 ADGRD1Q6QNK2 874 aa17.58■□□□□ 0.41
SYNC-202ENST00000409190 TMEM174Q8WUU8 243 aa17.58■□□□□ 0.41
SYNC-202ENST00000409190 PIWIL1Q96J94 861 aaKnown RBP17.58■□□□□ 0.41
SYNC-202ENST00000409190 NGRNQ9NPE2 291 aaKnown RBP17.58■□□□□ 0.41
SYNC-202ENST00000409190 SLC17A6Q9P2U8 582 aa17.58■□□□□ 0.41
SYNC-202ENST00000409190 DRG1Q9Y295 367 aaKnown RBP17.58■□□□□ 0.41
SYNC-202ENST00000409190 COL11A2P13942 1736 aaPredicted RBP17.58■□□□□ 0.4
SYNC-202ENST00000409190 USP1O94782 785 aa17.58■□□□□ 0.4
SYNC-202ENST00000409190 F7P08709 466 aaPredicted RBP17.58■□□□□ 0.4
SYNC-202ENST00000409190 RASA2Q15283 850 aa17.58■□□□□ 0.4
SYNC-202ENST00000409190 SGSM1Q2NKQ1 1148 aa17.58■□□□□ 0.4
SYNC-202ENST00000409190 TWNKQ96RR1 684 aa17.58■□□□□ 0.4
SYNC-202ENST00000409190 WRNIP1Q96S55 665 aa17.58■□□□□ 0.4
SYNC-202ENST00000409190 THTPAQ9BU02 230 aa17.58■□□□□ 0.4
SYNC-202ENST00000409190 DCLRE1BQ9H816 532 aa17.58■□□□□ 0.4
SYNC-202ENST00000409190 M0QYV0 167 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 RNF8O76064 485 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 ERBB2P04626 1255 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 GMPRP36959 345 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 SERPINB4P48594 390 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 KLC1Q07866 573 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 EFCAB3Q8N7B9 438 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 SRPK1Q96SB4 655 aaKnown RBP17.57■□□□□ 0.4
SYNC-202ENST00000409190 ZCWPW1Q9H0M4 648 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 SMYD3Q9H7B4 428 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 STOML1Q9UBI4 398 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 DKC1O60832 514 aaKnown RBP eCLIP17.57■□□□□ 0.4
SYNC-202ENST00000409190 ATP6V1C1P21283 382 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 POLE2P56282 527 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 IGBP1P78318 339 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 CHI3L2Q15782 390 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 DUOXA2Q1HG44 320 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 DDX56Q9NY93 547 aaKnown RBP17.57■□□□□ 0.4
SYNC-202ENST00000409190 CORO1CQ9ULV4 474 aaPredicted RBP17.57■□□□□ 0.4
SYNC-202ENST00000409190 MAGED2Q9UNF1 606 aaPredicted RBP17.57■□□□□ 0.4
SYNC-202ENST00000409190 SLC25A11Q02978 314 aaKnown RBP17.57■□□□□ 0.4
SYNC-202ENST00000409190 PPP1R14CQ8TAE6 165 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 CCDC110Q8TBZ0 833 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 DEFB129Q9H1M3 183 aa17.57■□□□□ 0.4
SYNC-202ENST00000409190 IQANK1A0A1B0GTG1 560 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 LDHAP00338 332 aaKnown RBP17.56■□□□□ 0.4
SYNC-202ENST00000409190 CXCL8P10145 99 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 NAMPTP43490 491 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 ROR1Q01973 937 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 OR6B2Q6IFH4 312 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 MMP19Q99542 508 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 MAGEB5Q9BZ81 275 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 CYLDQ9NQC7 956 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 USP18Q9UMW8 372 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 C3orf70A6NLC5 250 aaPredicted RBP17.56■□□□□ 0.4
SYNC-202ENST00000409190 TOM1L1O75674 476 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 CRADDP78560 199 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 C16orf46Q6P387 395 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 CASC4Q6P4E1 433 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.56■□□□□ 0.4
SYNC-202ENST00000409190 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 ZNF276Q8N554 614 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 POU5F2Q8N7G0 328 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 FBXO41Q8TF61 875 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 JDP2Q8WYK2 163 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 CCDC124Q96CT7 223 aaKnown RBP17.56■□□□□ 0.4
SYNC-202ENST00000409190 OXNAD1Q96HP4 312 aaPredicted RBP17.56■□□□□ 0.4
SYNC-202ENST00000409190 KCNK13Q9HB14 408 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 LRRC42Q9Y546 428 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 ONECUT3O60422 494 aaPredicted RBP17.56■□□□□ 0.4
SYNC-202ENST00000409190 WFS1O76024 890 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 CDK16Q00536 496 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 BST1Q10588 318 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 KRT81Q14533 505 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 DLK2Q6UY11 383 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 TREML1Q86YW5 311 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 USP6NLQ92738 828 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 HEXIM2Q96MH2 286 aaKnown RBP17.56■□□□□ 0.4
SYNC-202ENST00000409190 ADPGKQ9BRR6 497 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 IL1RAPL1Q9NZN1 696 aa17.56■□□□□ 0.4
SYNC-202ENST00000409190 H0YCG3 227 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 I3L4J1 428 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 TBC1D12O60347 775 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 KRT7P08729 469 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 AQP5P55064 265 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 CLDN10P78369 228 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 UBAP2LQ14157 1087 aaKnown RBP17.55■□□□□ 0.4
SYNC-202ENST00000409190 ZC3H12AQ5D1E8 599 aaKnown RBP17.55■□□□□ 0.4
SYNC-202ENST00000409190 WASHC2DQ5SRD0 308 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 EEF1DP3Q658K8 133 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 TEX9Q8N6V9 391 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 ZNF483Q8TF39 744 aaPredicted RBP17.55■□□□□ 0.4
SYNC-202ENST00000409190 PEBP4Q96S96 227 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 TSC22D3Q99576 134 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 SPATS2LQ9NUQ6 558 aaKnown RBP17.55■□□□□ 0.4
SYNC-202ENST00000409190 ZC3H7BQ9UGR2 993 aaKnown RBP17.55■□□□□ 0.4
SYNC-202ENST00000409190 ARHGAP42A6NI28 874 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 GNAT1P11488 350 aa17.55■□□□□ 0.4
SYNC-202ENST00000409190 PCGF5Q86SE9 256 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms