RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 RNPEPQ9H4A4 650 aa17.32■□□□□ 0.36
COL23A1-202ENST00000407622 PDGFCQ9NRA1 345 aa17.32■□□□□ 0.36
COL23A1-202ENST00000407622 HAO1Q9UJM8 370 aa17.32■□□□□ 0.36
COL23A1-202ENST00000407622 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.32■□□□□ 0.36
COL23A1-202ENST00000407622 TNFSF13BQ9Y275 285 aa17.32■□□□□ 0.36
COL23A1-202ENST00000407622 USH1CQ9Y6N9 552 aa17.32■□□□□ 0.36
COL23A1-202ENST00000407622 GRAP2O75791 330 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 DPYSL3Q14195 570 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 Q3C1V9 767 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 PLEKHG4Q58EX7 1191 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 AGGF1Q8N302 714 aaeCLIP17.31■□□□□ 0.36
COL23A1-202ENST00000407622 TCP10LQ8TDR4 215 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 TMEM176AQ96HP8 235 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 IFT122Q9HBG6 1241 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 ALG13Q9NP73 1137 aaKnown RBP17.31■□□□□ 0.36
COL23A1-202ENST00000407622 PPME1Q9Y570 386 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 KAT6AQ92794 2004 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 AVILO75366 819 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 RPSAP08865 295 aaKnown RBP17.31■□□□□ 0.36
COL23A1-202ENST00000407622 PHBP35232 272 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 SKIV2L2P42285 1042 aaKnown RBP17.31■□□□□ 0.36
COL23A1-202ENST00000407622 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
COL23A1-202ENST00000407622 TLDC1Q6P9B6 456 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 MOB2Q70IA6 237 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 PALM2Q8IXS6 379 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 LRRN4Q8WUT4 740 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 LRRC37BQ96QE4 947 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 ADPGKQ9BRR6 497 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 EBF2Q9HAK2 575 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 CYLDQ9NQC7 956 aa17.31■□□□□ 0.36
COL23A1-202ENST00000407622 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL23A1-202ENST00000407622 MCF2LO15068 1137 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 IL18RAPO95256 599 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 T-ENOLP0DO92 83 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 ELK3P41970 407 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 OVGP1Q12889 678 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 CDO1Q16878 200 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 GJC2Q5T442 439 aaPredicted RBP17.3■□□□□ 0.36
COL23A1-202ENST00000407622 PTPRN2Q92932 1015 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 OTUD5Q96G74 571 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 ELP3Q9H9T3 547 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 NPHS2Q9NP85 383 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 WDR35Q9P2L0 1181 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 RNF8O76064 485 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 CBX6O95503 412 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 ANP32DO95626 131 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 GABRB2P47870 512 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 GCLCP48506 637 aaPredicted RBP17.3■□□□□ 0.36
COL23A1-202ENST00000407622 CDH6P55285 790 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 SETDB1Q15047 1291 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 ZNF449Q6P9G9 518 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 PDIK1LQ8N165 341 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 BANPQ8N9N5 519 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 N4BP2L2Q92802 583 aaPredicted RBP17.3■□□□□ 0.36
COL23A1-202ENST00000407622 CLMNQ96JQ2 1002 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 HEXIM2Q96MH2 286 aaKnown RBP17.3■□□□□ 0.36
COL23A1-202ENST00000407622 MYCBPQ99417 103 aaPredicted RBP17.3■□□□□ 0.36
COL23A1-202ENST00000407622 FRMD8P1Q9BZ68 369 aaPredicted RBP17.3■□□□□ 0.36
COL23A1-202ENST00000407622 PPCSQ9HAB8 311 aa17.3■□□□□ 0.36
COL23A1-202ENST00000407622 NDC80O14777 642 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 ZWINTO95229 277 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 MAP3K6O95382 1288 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 C22orf31O95567 290 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 RNASELQ05823 741 aaKnown RBP17.29■□□□□ 0.36
COL23A1-202ENST00000407622 AMHR2Q16671 573 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 KLHL38Q2WGJ6 581 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 GIMAP7Q8NHV1 300 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 PHACTR1Q9C0D0 580 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 TXLNGQ9NUQ3 528 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 GPATCH2LQ9NWQ4 482 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 FETUBQ9UGM5 382 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 SCN4AP35499 1836 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 A0A087WZ62 844 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 KBTBD13C9JR72 458 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 E5RJQ4 531 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 ROR1Q01973 937 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 NOMO1Q15155 1222 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 SLC10A6Q3KNW5 377 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 DARS2Q6PI48 645 aaKnown RBP17.29■□□□□ 0.36
COL23A1-202ENST00000407622 FAM183BPQ6ZVS7 135 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 C12orf29Q8N999 325 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 RXFP2Q8WXD0 754 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 SERAC1Q96JX3 654 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 FDXACB1Q9BRP7 624 aaPredicted RBP17.29■□□□□ 0.36
COL23A1-202ENST00000407622 PDZD7Q9H5P4 517 aa17.29■□□□□ 0.36
COL23A1-202ENST00000407622 SSU72Q9NP77 194 aaKnown RBP17.29■□□□□ 0.36
COL23A1-202ENST00000407622 TCRBV9S1A1TA0A576 114 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 ENDOD1O94919 500 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 TXNP10599 105 aaKnown RBP17.28■□□□□ 0.36
COL23A1-202ENST00000407622 ELF1P32519 619 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 ZNF143P52747 638 aaPredicted RBP17.28■□□□□ 0.36
COL23A1-202ENST00000407622 NDST1P52848 882 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 TTLL12Q14166 644 aaPredicted RBP17.28■□□□□ 0.36
COL23A1-202ENST00000407622 KCNJ11Q14654 390 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 KBTBD12Q3ZCT8 623 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms