RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FAM126AQ9BYI3 521 aaPredicted RBP20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 LINC00597Q9H2U6 94 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 MMRN2Q9H8L6 949 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 ECT2Q9H8V3 914 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 EHD2Q9NZN4 543 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 CCDC130P13994 396 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 RPL13P26373 211 aaKnown RBP20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 GJA4P35212 333 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 PSMC2P35998 433 aaKnown RBP20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 NUCB2P80303 420 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 DMWDQ09019 674 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 PPP2R5DQ14738 602 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 EML3Q32P44 896 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 NUP93Q8N1F7 819 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 ENGASEQ8NFI3 743 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 SCAMP5Q8TAC9 235 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 RUBCNQ92622 972 aa20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 ERCC4Q92889 916 aaPredicted RBP20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 APOBEC3GQ9HC16 384 aaKnown RBP20.49■□□□□ 0.87
SMARCB1-204ENST00000407422 CEP250Q9BV73 2442 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 TRDMT1O14717 391 aaKnown RBP20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 KRT13P13646 458 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 IFNAR2P48551 515 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 PKN3Q6P5Z2 889 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 C12orf29Q8N999 325 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 SLITRK1Q96PX8 696 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 EPC1Q9H2F5 836 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 ATP8B3O60423 1300 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 MYOFQ9NZM1 2061 aa20.48■□□□□ 0.87
SMARCB1-204ENST00000407422 GOLGA6L4A6NEF3 574 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 K7ESF4 209 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 LEFTY2O00292 366 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 TNFRSF10BO14763 440 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 BEST1O76090 585 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 OAS1P00973 400 aaKnown RBP20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 TCF3P15923 654 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 YWHAQP27348 245 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 PPP3CCP48454 512 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 PDE6CP51160 858 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 GALK1P51570 392 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 NRLP54845 237 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 GRSF1Q12849 480 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 KIAA2013Q8IYS2 634 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 CRYBG2Q8N1P7 616 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 SYNPOQ8N3V7 929 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 CPA6Q8N4T0 437 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 SLC2A14Q8TDB8 520 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 ATP2A3Q93084 1043 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 SMARCD1Q96GM5 515 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 CCDC34Q96HJ3 373 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 TWNKQ96RR1 684 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 DMAP1Q9NPF5 467 aaPredicted RBP20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 KRT82Q9NSB4 513 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 FAM49BQ9NUQ9 324 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 SMPD4Q9NXE4 827 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 SMG5Q9UPR3 1016 aaKnown RBP20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 MYO16Q9Y6X6 1858 aa20.47■□□□□ 0.87
SMARCB1-204ENST00000407422 AP1G2O75843 785 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 OLFM2O95897 454 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 EGFP01133 1207 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 PFKLP17858 780 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 PRCPP42785 496 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 SLC7A9P82251 487 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 EDRF1Q3B7T1 1238 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 ZMIZ2Q8NF64 920 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 FBXO32Q969P5 355 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 SMOQ99835 787 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 CHORDC1Q9UHD1 332 aaPredicted RBP20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 CPQQ9Y646 472 aa20.46■□□□□ 0.87
SMARCB1-204ENST00000407422 CHURC1-FNTBB4DL54 471 aa20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 SCAMP3O14828 347 aaKnown RBP20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 RTN3O95197 1032 aaPredicted RBP20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 PAPSS2O95340 614 aaPredicted RBP20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 FNTBP49356 437 aa20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 SLC5A3P53794 718 aa20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 AMPD2Q01433 879 aa20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 HEATR6Q6AI08 1181 aaKnown RBP20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 UNC93AQ86WB7 457 aa20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 P2RY13Q9BPV8 354 aa20.45■□□□□ 0.87
SMARCB1-204ENST00000407422 MCCD1P59942 119 aaPredicted RBP20.45■□□□□ 0.86
SMARCB1-204ENST00000407422 ENPEPQ07075 957 aa20.45■□□□□ 0.86
SMARCB1-204ENST00000407422 INCA1Q0VD86 236 aa20.45■□□□□ 0.86
SMARCB1-204ENST00000407422 IMPG2Q9BZV3 1241 aa20.45■□□□□ 0.86
SMARCB1-204ENST00000407422 TMEM8AQ9HCN3 771 aa20.45■□□□□ 0.86
SMARCB1-204ENST00000407422 RMND1Q9NWS8 449 aa20.45■□□□□ 0.86
SMARCB1-204ENST00000407422 IL37Q9NZH6 218 aa20.45■□□□□ 0.86
SMARCB1-204ENST00000407422 PCDHA5Q9Y5H7 936 aa20.45■□□□□ 0.86
SMARCB1-204ENST00000407422 SDK1Q7Z5N4 2213 aa20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 MAP3K7CLP57077 242 aa20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 SRSF5Q13243 272 aaKnown RBP20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 ZNF658Q5TYW1 1059 aaPredicted RBP20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 FILIP1Q7Z7B0 1213 aa20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 EZH1Q92800 747 aaPredicted RBP20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 SEMA4DQ92854 862 aa20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 GSDMAQ96QA5 445 aa20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 NIF3L1Q9GZT8 377 aa20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 POLR3BQ9NW08 1133 aaPredicted RBP20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 NCDNQ9UBB6 729 aa20.44■□□□□ 0.86
SMARCB1-204ENST00000407422 COCHO43405 550 aa20.43■□□□□ 0.86
SMARCB1-204ENST00000407422 RNF40O75150 1001 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms