RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 EID2BQ96D98 161 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 Q96MF0 132 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 SLAMF7Q9NQ25 335 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 RGL1Q9NZL6 768 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 CDYLQ9Y232 598 aa5.77□□□□□ -1.49
HMGB1P13-201ENST00000406019 AQP12BA6NM10 295 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 J3KRW8 73 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 EYA2O00167 538 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 IPO5O00410 1097 aaKnown RBP5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 RHOBTB3O94955 611 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 UNC5CO95185 931 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 PYGLP06737 847 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 DDX10Q13206 875 aaKnown RBP5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 GRM1Q13255 1194 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 SMN1Q16637 294 aaKnown RBP5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 DCAF12L1Q5VU92 463 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 PPP1R32Q7Z5V6 425 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 LCORLQ8N3X6 602 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 SSH3Q8TE77 659 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 DDX17Q92841 729 aaKnown RBP5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 USP13Q92995 863 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 SCAMP4Q969E2 229 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 SKA1Q96BD8 255 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 MAGEB5Q9BZ81 275 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 ZHX3Q9H4I2 956 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 CYP4F11Q9HBI6 524 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 ZNF212Q9UDV6 495 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 CAPN11Q9UMQ6 739 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 AGAP1Q9UPQ3 857 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 SCINQ9Y6U3 715 aa5.76□□□□□ -1.49
HMGB1P13-201ENST00000406019 PRAMEF33A0A0G2JMD5 474 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 EIF3FO00303 357 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 TRIM38O00635 465 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 IRAK2O43187 625 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 PROM1O43490 865 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 EPB41L2O43491 1005 aaKnown RBP5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 PRAMEF10O60809 474 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 GNAI2P04899 355 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 IL1R2P27930 398 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 AVPR1BP47901 424 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 TOB1P50616 345 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 COPAP53621 1224 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 UCP3P55916 312 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 GEMIN4P57678 1058 aaKnown RBP5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 MXRA7P84157 204 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 RRAGBQ5VZM2 374 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 KIAA0895LQ68EN5 471 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 FBXO38Q6PIJ6 1188 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 FOXR2Q6PJQ5 311 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 OLFML1Q6UWY5 402 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 KIAA0408Q6ZU52 694 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 PRIMA1Q86XR5 153 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 SLC15A4Q8N697 577 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 PCSK9Q8NBP7 692 aaKnown RBP5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 POC1BQ8TC44 478 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 IPO4Q8TEX9 1081 aaKnown RBP5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 STYXQ8WUJ0 223 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 IPCEF1Q8WWN9 437 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 KCTD5Q9NXV2 234 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 FOXJ2Q9P0K8 574 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 MTO1Q9Y2Z2 717 aaKnown RBP5.75□□□□□ -1.49
HMGB1P13-201ENST00000406019 CCDC195A0A1B0GUA6 201 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 RRN3P2A6NIE6 340 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 GRPP07492 148 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 PIM1P11309 404 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 BTF3P20290 206 aaKnown RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 GATA3P23771 443 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 CASP2P42575 452 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 ANXA11P50995 505 aaKnown RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 PSMC1P62191 440 aaKnown RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 MPP3Q13368 585 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 DYRK1AQ13627 763 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 TAF5Q15542 800 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 HYIQ5T013 277 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 ARL6IP4Q66PJ3 421 aaKnown RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 TAPT1Q6NXT6 567 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 USP17L6PQ6QN14 398 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 Q6ZNX1 250 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 USP37Q86T82 979 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 ADGRG5Q8IZF4 528 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 SLC44A3Q8N4M1 653 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 FAM98AQ8NCA5 519 aaKnown RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 SLC17A8Q8NDX2 589 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 NSUN7Q8NE18 718 aaKnown RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 SPSB4Q96A44 273 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 LRRC46Q96FV0 321 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 SNX27Q96L92 541 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 ZSCAN31Q96LW9 406 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 SPATA5L1Q9BVQ7 753 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 KATNAL1Q9BW62 490 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 STK31Q9BXU1 1019 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 IMPG2Q9BZV3 1241 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 TINAGL1Q9GZM7 467 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 MID2Q9UJV3 735 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 ITGB1BP2Q9UKP3 347 aa5.74□□□□□ -1.49
HMGB1P13-201ENST00000406019 E7ENX8 843 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 MGST3O14880 152 aa5.73□□□□□ -1.49
HMGB1P13-201ENST00000406019 CHEK2O96017 543 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms