RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PDHA1P08559 390 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 ADRB1P08588 477 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 ITGAMP11215 1152 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 PPP3CBP16298 524 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 IL1R2P27930 398 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 PPM1AP35813 382 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 PTDSS1P48651 473 aaKnown RBP5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 DGKEP52429 567 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 ARHGEF7Q14155 803 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 SF3B3Q15393 1217 aaKnown RBP5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 NPY5RQ15761 445 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 DGKKQ5KSL6 1271 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 CACHD1Q5VU97 1274 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 FCRL6Q6DN72 434 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 RGS7BPQ6MZT1 257 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 KCNV1Q6PIU1 500 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 ARHGEF19Q8IW93 802 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 YAF2Q8IY57 180 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 PROKR1Q8TCW9 393 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 BRI3BPQ8WY22 251 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 LPIN2Q92539 896 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 PTCD3Q96EY7 689 aaKnown RBP5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 ZC3H10Q96K80 434 aaKnown RBP5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 WDR11Q9BZH6 1224 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 AMBRA1Q9C0C7 1298 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 XPNPEP3Q9NQH7 507 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 ZSCAN32Q9NX65 697 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 DNMT3BQ9UBC3 853 aaKnown RBP5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 SSX2IPQ9Y2D8 614 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 MAN2B2Q9Y2E5 1009 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 PZPP20742 1482 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 CEP152O94986 1710 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 SIGLEC1Q9BZZ2 1709 aa5.94□□□□□ -1.46
HMGB3P19-201ENST00000403971 FER1L4A9Z1Z3 1794 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 TPD52L2O43399 206 aaKnown RBP5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 TRIAP1O43715 76 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 RRP9O43818 475 aaKnown RBP5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 NDST3O95803 873 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 ERBB2P04626 1255 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 CSF1RP07333 972 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 KCNA3P22001 575 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 LRPAP1P30533 357 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 PTGS2P35354 604 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 HSPA7P48741 367 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 STK3Q13188 491 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 KCNAB1Q14722 419 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 MPEG1Q2M385 716 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 ARMC6Q6NXE6 501 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 FAM109AQ8N4B1 249 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 TMEM171Q8WVE6 324 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 PPP2R3CQ969Q6 453 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 ZNF566Q969W8 418 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 FUBP1Q96AE4 644 aaKnown RBP5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 OSBPL9Q96SU4 736 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 CRB3Q9BUF7 120 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 ACTRT3Q9BYD9 372 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 ZNF341Q9BYN7 854 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 TPSD1Q9BZJ3 242 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 MMRN2Q9H8L6 949 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 ARFGAP3Q9NP61 516 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 TESQ9UGI8 421 aaKnown RBP5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 CDY1Q9Y6F8 540 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 LMTK2Q8IWU2 1503 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 NUP155O75694 1391 aa5.93□□□□□ -1.46
HMGB3P19-201ENST00000403971 E9PCH4 1651 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 SPHKAPQ2M3C7 1700 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 F5H423 210 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 PPM1DO15297 605 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 SRGAP2O75044 1071 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 RASAL1O95294 804 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 EGR2P11161 476 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 MYL4P12829 197 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 INSRRP14616 1297 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 TPH1P17752 444 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 EEF1GP26641 437 aaKnown RBP5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 ADORA2AP29274 412 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 BUD31P41223 144 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 CPT1AP50416 773 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 PRKAG1P54619 331 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 BTKQ06187 659 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 CHAF1AQ13111 956 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 INSCQ1MX18 579 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 PLAG1Q6DJT9 500 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 CATSPERGQ6ZRH7 1159 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 BEND5Q7L4P6 421 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 SDR16C5Q8N3Y7 309 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 VGLL2Q8N8G2 317 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 DNAJB14Q8TBM8 379 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 POF1BQ8WVV4 589 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 IPCEF1Q8WWN9 437 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 FAM136AQ96C01 138 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 C18orf8Q96DM3 657 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 ZNF747Q9BV97 191 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 WDR12Q9GZL7 423 aaKnown RBP5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 SERHL2Q9H4I8 314 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 GBA2Q9HCG7 927 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 PTPRHQ9HD43 1115 aa5.92□□□□□ -1.46
HMGB3P19-201ENST00000403971 TBCCD1Q9NVR7 557 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms