RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PHF2O75151 1096 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 KRT7P08729 469 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 CLTBP09497 229 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 RALAP11233 206 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 IL1R2P27930 398 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 MIPP30301 263 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 CHRNA3P32297 505 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 COPS2P61201 443 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 YWHAHQ04917 246 aaPredicted RBP13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 CYP1B1Q16678 543 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 EFHC1Q5JVL4 640 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 BEND6Q5SZJ8 279 aaPredicted RBP13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 SH3PXD2AQ5TCZ1 1133 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 LRRTM3Q86VH5 581 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 OR10T2Q8NGX3 314 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 RAPGEF5Q92565 580 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 PKMYT1Q99640 499 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 HERPUD2Q9BSE4 406 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 COLEC11Q9BWP8 271 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 HEMGNQ9BXL5 484 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 OSBPL8Q9BZF1 889 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 PLEKHA4Q9H4M7 779 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 GDF3Q9NR23 364 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 KRT82Q9NSB4 513 aa13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 TDRD15B5MCY1 1934 aaKnown RBP13.95□□□□□ -0.18
CEACAM1-206ENST00000403136 PI4K2BG5E9Z4 385 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 SEC31AO94979 1220 aaKnown RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 OAZ2O95190 189 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 TRUB2O95900 331 aaKnown RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 KRT1P04264 644 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 SDC4P31431 198 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 TSPY1Q01534 308 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 GUCY2DQ02846 1103 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 IKBKEQ14164 716 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 MAPRE1Q15691 268 aaKnown RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 LRRC26Q2I0M4 334 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 C15orf59Q2T9L4 293 aaPredicted RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 ODF2Q5BJF6 829 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 MFSD7Q6UXD7 560 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 ANKS1BQ7Z6G8 1248 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 ZMIZ2Q8NF64 920 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 SMARCD1Q96GM5 515 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 CFAP57Q96MR6 1250 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 KCNK16Q96T55 309 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 LRRC19Q9H756 370 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 ZWILCHQ9H900 591 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 CSNK1G1Q9HCP0 422 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 TMLHEQ9NVH6 421 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 PCSK1NQ9UHG2 260 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 USP18Q9UMW8 372 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 FAN1Q9Y2M0 1017 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 RFC2P35250 354 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 NDUFV1P49821 464 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 MRPS5P82675 430 aaKnown RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 ADCY1Q08828 1119 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 ADIGQ0VDE8 80 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 KLF1Q13351 362 aaPredicted RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 VWCEQ96DN2 955 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 TMEM209Q96SK2 561 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 NCAPGQ9BPX3 1015 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 KLHL11Q9NVR0 708 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 PCYOX1Q9UHG3 505 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 ADAM28Q9UKQ2 775 aa13.94□□□□□ -0.18
CEACAM1-206ENST00000403136 TTC3P53804 2025 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 ZSCAN5CA6NGD5 496 aaPredicted RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 BHMG1C9JSJ3 638 aaPredicted RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 SYN3O14994 580 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 TTI1O43156 1089 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 MYBL2P10244 700 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 DESP17661 470 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 TNFRSF8P28908 595 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 COILP38432 576 aaPredicted RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 PTPN9P43378 593 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 SLC11A1P49279 550 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 CTCFP49711 727 aaPredicted RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 TKTL1P51854 596 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 CACNA2D1P54289 1103 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 ATP11AP98196 1134 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 DR1Q01658 176 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 DHX34Q14147 1143 aaKnown RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 MAP9Q49MG5 647 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 RAB41Q5JT25 222 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 KCNT1Q5JUK3 1230 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 TTC27Q6P3X3 843 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 CCDC137Q6PK04 289 aaKnown RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 SIX6OS1Q8N1H7 587 aa13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 C12orf50Q8NA57 414 aaPredicted RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 NDRG1Q92597 394 aaKnown RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 ACSF2Q96CM8 615 aaPredicted RBP13.93□□□□□ -0.18
CEACAM1-206ENST00000403136 RUNDC3BQ96NL0 473 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms