RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 LBX2Q6XYB7 198 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 ENDOVQ8N8Q3 282 aaKnown RBP14.75□□□□□ -0.05
ATG3-202ENST00000402314 PPFIBP2Q8ND30 876 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.75□□□□□ -0.05
ATG3-202ENST00000402314 GRK7Q8WTQ7 553 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 CLMNQ96JQ2 1002 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 TUBGCP5Q96RT8 1024 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 KANSL3Q9P2N6 904 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 MARCOQ9UEW3 520 aaPredicted RBP14.75□□□□□ -0.05
ATG3-202ENST00000402314 LRCH1Q9Y2L9 728 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 IGKV6D-21A0A0A0MT36 114 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 LIASO43766 372 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 ATP5HO75947 161 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 HAUS5O94927 633 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 PSMG1O95456 288 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 LDHAP00338 332 aaKnown RBP14.75□□□□□ -0.05
ATG3-202ENST00000402314 KLRC2P26717 231 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 ICAM3P32942 547 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 KDSRQ06136 332 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
ATG3-202ENST00000402314 NR1H3Q13133 447 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 TRPC3Q13507 836 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 WASHC2DQ5SRD0 308 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 IRGCQ6NXR0 463 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 FBXO16Q8IX29 292 aaPredicted RBP14.75□□□□□ -0.05
ATG3-202ENST00000402314 EXD1Q8NHP7 514 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 MAIP1Q8WWC4 291 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 INPP5DQ92835 1189 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 HMGXB4Q9UGU5 601 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 PCSK1NQ9UHG2 260 aa14.75□□□□□ -0.05
ATG3-202ENST00000402314 MAFO75444 373 aaPredicted RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 TOM1L1O75674 476 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 CD48P09326 243 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 CXCL8P10145 99 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 PYGBP11216 843 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 TBXAS1P24557 533 aaPredicted RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 ZNF132P52740 706 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 CCDC15Q0P6D6 951 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 LBRQ14739 615 aaKnown RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 TAF5Q15542 800 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 FYB2Q5VWT5 728 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 IZUMO2Q6UXV1 221 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 APOBEC3FQ8IUX4 373 aaKnown RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 KIAA0319LQ8IZA0 1049 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SLC16A10Q8TF71 515 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 TTC17Q96AE7 1141 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 ACO2Q99798 780 aaKnown RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 ELP3Q9H9T3 547 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 TXNRD2Q9NNW7 524 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 LMCD1Q9NZU5 365 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 DOCK1Q14185 1865 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 LCTP09848 1927 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SIGLEC16A6NMB1 481 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 H3BRJ5 948 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 MAP3K7O43318 606 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 ENO1P06733 434 aaKnown RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 IQCF3P0C7M6 154 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 ESRRAP11474 423 aaPredicted RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 PDK4Q16654 411 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 PTPN20Q4JDL3 420 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 LRRC23Q53EV4 343 aaPredicted RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 RAB6CQ53S08 254 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 ALYREFQ86V81 257 aaKnown RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 CCDC89Q8N998 374 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 FBXO41Q8TF61 875 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SEPT1Q8WYJ6 367 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SPATC1LQ9H0A9 340 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 RAB6CQ9H0N0 254 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 ZNF395Q9H8N7 513 aaPredicted RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 KRT82Q9NSB4 513 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 GPRC5DQ9NZD1 345 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SCINQ9Y6U3 715 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 ZBTB42B2RXF5 422 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 STAM2O75886 525 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 IL1R2P27930 398 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SLC34A1Q06495 639 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 STAT4Q14765 748 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SGSM1Q2NKQ1 1148 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 ZNF699Q32M78 642 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 Q3C1V9 767 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 WDR72Q3MJ13 1102 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 TRIM72Q6ZMU5 477 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SPOCD1Q6ZMY3 1216 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 CFAP61Q8NHU2 1237 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 TCP10LQ8TDR4 215 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 BTBD10Q9BSF8 475 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 MRPL4Q9BYD3 311 aaKnown RBP14.74□□□□□ -0.05
ATG3-202ENST00000402314 NIF3L1Q9GZT8 377 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 PDGFCQ9NRA1 345 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.74□□□□□ -0.05
ATG3-202ENST00000402314 TAS2R1Q9NYW7 299 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 IP6K2Q9UHH9 426 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 CNTN6Q9UQ52 1028 aa14.74□□□□□ -0.05
ATG3-202ENST00000402314 NOP56O00567 594 aaKnown RBP14.73□□□□□ -0.05
ATG3-202ENST00000402314 HOXC6P09630 235 aa14.73□□□□□ -0.05
ATG3-202ENST00000402314 GDF10P55107 478 aa14.73□□□□□ -0.05
ATG3-202ENST00000402314 PDIA2Q13087 525 aaKnown RBP14.73□□□□□ -0.05
ATG3-202ENST00000402314 DUOXA2Q1HG44 320 aa14.73□□□□□ -0.05
ATG3-202ENST00000402314 SLC5A9Q2M3M2 681 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms