RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 CDH5P33151 784 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 NTHL1P78549 312 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 GRASPQ7Z6J2 395 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 GPR149Q86SP6 731 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 C1orf131Q8NDD1 294 aaKnown RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 CPA5Q8WXQ8 436 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 ZNF512Q96ME7 567 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 PDCL3Q9H2J4 239 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 ADAM7Q9H2U9 754 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 ZNF334Q9HCZ1 680 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 IL37Q9NZH6 218 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 MAGED2Q9UNF1 606 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 PATJQ8NI35 1801 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 DDX3XO00571 662 aaKnown RBP eCLIP16.82■□□□□ 0.286e-37■■■□□ 18.5
HMGA1-204ENST00000401473 SRGAP2BP0DMP2 458 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 UNGP13051 313 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 CCR2P41597 374 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 RPL34P49207 117 aaKnown RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 KIF11P52732 1056 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 SLC8A3P57103 927 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 NOMO3P69849 1222 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 ELMSAN1Q6PJG2 1045 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 SLC30A5Q8TAD4 765 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 SMG7Q92540 1137 aaKnown RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 MYRFLQ96LU7 910 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 CPXM1Q96SM3 734 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 CORO1BQ9BR76 489 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 SLC4A5Q9BY07 1137 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 ADAMTS1Q9UHI8 967 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 COG5Q9UP83 839 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 ASB3Q9Y575 518 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 BZW2Q9Y6E2 419 aaKnown RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 USP3Q9Y6I4 520 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 CSH1P0DML2 217 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 CSH2P0DML3 217 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 TNFAIP3P21580 790 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 PGFP49763 221 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 IFRD2Q12894 506 aaPredicted RBP16.81■□□□□ 0.28
HMGA1-204ENST00000401473 PDCLQ13371 301 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 PLD1Q13393 1074 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 C2CD6Q53TS8 623 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 TDRD12Q587J7 1177 aaKnown RBP16.81■□□□□ 0.28
HMGA1-204ENST00000401473 GAREM2Q75VX8 874 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 DNAAF5Q86Y56 855 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 TMC8Q8IU68 726 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 STK32AQ8WU08 396 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 KCTD13Q8WZ19 329 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 NDRG1Q92597 394 aaKnown RBP16.81■□□□□ 0.28
HMGA1-204ENST00000401473 CEP295NLQ96MC4 621 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 ST7Q9NRC1 585 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 TAS2R14Q9NYV8 317 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 CD207Q9UJ71 328 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 DENND4CQ5VZ89 1909 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 ANAPC1Q9H1A4 1944 aa16.81■□□□□ 0.28
HMGA1-204ENST00000401473 FAM92AA1XBS5 289 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 GRXCR2A6NFK2 248 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 XYLBO75191 536 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 RHOP08100 348 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 PTPN2P17706 415 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 TKTL1P51854 596 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 ITIH3Q06033 890 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 VEPH1Q14D04 833 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 ASTE1Q2TB18 679 aaPredicted RBP16.8■□□□□ 0.28
HMGA1-204ENST00000401473 PTPN20Q4JDL3 420 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 NAA35Q5VZE5 725 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 TMEM110Q86TL2 294 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 SCUBE3Q8IX30 993 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 TMEM35BQ8NCS4 154 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 HSFY1Q96LI6 401 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 TTLL2Q9BWV7 592 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 IL21Q9HBE4 155 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 SEPT11Q9NVA2 429 aaKnown RBP16.8■□□□□ 0.28
HMGA1-204ENST00000401473 CHORDC1Q9UHD1 332 aaPredicted RBP16.8■□□□□ 0.28
HMGA1-204ENST00000401473 DOCK8Q8NF50 2099 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 A0A087X0T9 212 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 POU2F2P09086 479 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 FAM228BP0C875 321 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 EIF4A3P38919 411 aaKnown RBP16.8■□□□□ 0.28
HMGA1-204ENST00000401473 TAF10Q12962 218 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 CLEC16AQ2KHT3 1053 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 SLC5A9Q2M3M2 681 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 TSR1Q2NL82 804 aaKnown RBP16.8■□□□□ 0.28
HMGA1-204ENST00000401473 LEXMQ3ZCV2 418 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 POTEHQ6S545 545 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 CCDC186Q7Z3E2 898 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 ITIH5Q86UX2 942 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 TCEAL4Q96EI5 215 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 TRMT2BQ96GJ1 504 aaKnown RBP16.8■□□□□ 0.28
HMGA1-204ENST00000401473 PPP1R13BQ96KQ4 1090 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 PANX2Q96RD6 677 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 PIDD1Q9HB75 910 aa16.8■□□□□ 0.28
HMGA1-204ENST00000401473 E5RJQ4 531 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 MOSPD3O75425 235 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 LSM8O95777 96 aaKnown RBP16.79■□□□□ 0.28
HMGA1-204ENST00000401473 F11P03951 625 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 USP17L7P0C7H9 530 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 LCP1P13796 627 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 YWHAQP27348 245 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms