RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 TDGF1P13385 188 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
ATG4B-203ENST00000400772 BMP6P22004 513 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
ATG4B-203ENST00000400772 FANCMQ8IYD8 2048 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 SLC2A14Q8TDB8 520 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 SH3RF2Q8TEC5 729 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 OSCP1Q8WVF1 389 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 SMARCD1Q96GM5 515 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 CYP3A43Q9HB55 503 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 CSNK1G1Q9HCP0 422 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 KRT82Q9NSB4 513 aa16.83■□□□□ 0.28
ATG4B-203ENST00000400772 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.28
ATG4B-203ENST00000400772 ATP8B3O60423 1300 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 ZFHX2Q9C0A1 2572 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-203ENST00000400772 SLC16A3O15427 465 aaKnown RBP16.82■□□□□ 0.28
ATG4B-203ENST00000400772 AP1G2O75843 785 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 OAS1P00973 400 aaKnown RBP16.82■□□□□ 0.28
ATG4B-203ENST00000400772 YWHAQP27348 245 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 SLC5A3P53794 718 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 SLC7A9P82251 487 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 IFRD2Q12894 506 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-203ENST00000400772 CCINQ13939 588 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 PDGFRLQ15198 375 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 EML3Q32P44 896 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 CBWD6Q4V339 395 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 CBWD3Q5JTY5 395 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 CBWD5Q5RIA9 395 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-203ENST00000400772 Q6ZS52 159 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 TSG101Q99816 390 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 IER2Q9BTL4 223 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 IMPG2Q9BZV3 1241 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 NIF3L1Q9GZT8 377 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 LINC00597Q9H2U6 94 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 DMAP1Q9NPF5 467 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-203ENST00000400772 FAM49BQ9NUQ9 324 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 RAB20Q9NX57 234 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 DUS2Q9NX74 493 aaKnown RBP16.82■□□□□ 0.28
ATG4B-203ENST00000400772 CHORDC1Q9UHD1 332 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-203ENST00000400772 WNT6Q9Y6F9 365 aa16.82■□□□□ 0.28
ATG4B-203ENST00000400772 FAM92AA1XBS5 289 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 LEFTY2O00292 366 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 CILPO75339 1184 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 RTN3O95197 1032 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-203ENST00000400772 ABL1P00519 1130 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 ZDHHC11BP0C7U3 371 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 PGFP49763 221 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 MXI1P50539 228 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 PDE6CP51160 858 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 SATB1Q01826 763 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 LRRC63Q05C16 580 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 LRRC32Q14392 662 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 DGKKQ5KSL6 1271 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 SNX30Q5VWJ9 437 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 NAIF1Q69YI7 327 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-203ENST00000400772 ZBTB44Q8NCP5 570 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 FBXL13Q8NEE6 735 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 TTC16Q8NEE8 873 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 TATDN2Q93075 761 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 FBXO32Q969P5 355 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 DHTKD1Q96HY7 919 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-203ENST00000400772 SLITRK1Q96PX8 696 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 HNRNPABQ99729 332 aaKnown RBP16.81■□□□□ 0.28
ATG4B-203ENST00000400772 DUSP9Q99956 384 aaKnown RBP16.81■□□□□ 0.28
ATG4B-203ENST00000400772 NT5C1AQ9BXI3 368 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 GTPBP4Q9BZE4 634 aaKnown RBP16.81■□□□□ 0.28
ATG4B-203ENST00000400772 SEMA4AQ9H3S1 761 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 ECT2Q9H8V3 914 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 FBRSL1Q9HCM7 1045 aaKnown RBP16.81■□□□□ 0.28
ATG4B-203ENST00000400772 C2orf42Q9NWW7 574 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 COMMD8Q9NX08 183 aa16.81■□□□□ 0.28
ATG4B-203ENST00000400772 PPP1R3GB7ZBB8 358 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 HHLA1C9JL84 531 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 TRDMT1O14717 391 aaKnown RBP16.8■□□□□ 0.28
ATG4B-203ENST00000400772 KINO60870 393 aaKnown RBP16.8■□□□□ 0.28
ATG4B-203ENST00000400772 LILRB5O75023 590 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 LMNAP02545 664 aaKnown RBP16.8■□□□□ 0.28
ATG4B-203ENST00000400772 CD58P19256 250 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 ADORA2BP29275 332 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 GJA4P35212 333 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 MAP3K7CLP57077 242 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 MORC3Q14149 939 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 TMEM196Q5HYL7 178 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 FSTL4Q6MZW2 842 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 ZC3H14Q6PJT7 736 aaKnown RBP16.8■□□□□ 0.28
ATG4B-203ENST00000400772 CLEC20AQ6ZU45 233 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 SPEM1Q8N4L4 309 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 OVCA2Q8WZ82 227 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 CYFIP2Q96F07 1278 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 FAXDC2Q96IV6 333 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 ZSCAN32Q9NX65 697 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 COQ4Q9Y3A0 265 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 CPQQ9Y646 472 aa16.8■□□□□ 0.28
ATG4B-203ENST00000400772 STX10O60499 249 aa16.79■□□□□ 0.28
ATG4B-203ENST00000400772 CXCL12P48061 93 aa16.79■□□□□ 0.28
ATG4B-203ENST00000400772 IFNAR2P48551 515 aa16.79■□□□□ 0.28
ATG4B-203ENST00000400772 GALK1P51570 392 aa16.79■□□□□ 0.28
ATG4B-203ENST00000400772 CCR3P51677 355 aa16.79■□□□□ 0.28
ATG4B-203ENST00000400772 DCAF17Q5H9S7 520 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms