RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SERAC1Q96JX3 654 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 MXRA8Q9BRK3 442 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 ARHGEF4Q9NR80 690 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 HSFX1Q9UBD0 423 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 RABGEF1Q9UJ41 708 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 ZNF232Q9UNY5 417 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 C15orf38-AP3S2A0A0A6YYH1 394 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 MTA2O94776 668 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 FAM163BP0C2L3 166 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 PABPC4LP0CB38 370 aaKnown RBP17.8■□□□□ 0.44
PTPRA-205ENST00000399903 UQCRBP14927 111 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 RFX1P22670 979 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 HPCAP84074 193 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 ARPINQ7Z6K5 226 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 MCOLN2Q8IZK6 566 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 VPS11Q9H270 941 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 DMAC2Q9NW81 257 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 DDX43Q9NXZ2 648 aaKnown RBP17.8■□□□□ 0.44
PTPRA-205ENST00000399903 SLC24A2Q9UI40 661 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 ADAMTS6Q9UKP5 1117 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 HEMK1Q9Y5R4 338 aaPredicted RBP17.8■□□□□ 0.44
PTPRA-205ENST00000399903 TNS1Q9HBL0 1735 aaKnown RBP17.8■□□□□ 0.44
PTPRA-205ENST00000399903 SLC16A4O15374 487 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 ICAM1P05362 532 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 PADI6Q6TGC4 694 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 RSPH3Q86UC2 560 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 FAM83AQ86UY5 434 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 ATP11CQ8NB49 1132 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 CFAP36Q96G28 342 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 WRNIP1Q96S55 665 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 EBF4Q9BQW3 602 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 TAGLN3Q9UI15 199 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 FAF1Q9UNN5 650 aaPredicted RBP17.8■□□□□ 0.44
PTPRA-205ENST00000399903 CLUHO75153 1309 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 RAG1P15918 1043 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 MAGEA8P43361 318 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 BST1Q10588 318 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 CLEC16AQ2KHT3 1053 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 DENND5BQ6ZUT9 1274 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 FAM160B2Q86V87 743 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 PPM1NQ8N819 430 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 STKLD1Q8NE28 680 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 RAB3IL1Q8TBN0 382 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 SYTL5Q8TDW5 730 aaPredicted RBP17.79■□□□□ 0.44
PTPRA-205ENST00000399903 AGTPBP1Q9UPW5 1226 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 LIASO43766 372 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 TOM1L1O75674 476 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 PENKP01210 267 aaPredicted RBP17.79■□□□□ 0.44
PTPRA-205ENST00000399903 ADRB2P07550 413 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 CFHP08603 1231 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 PMLP29590 882 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 CHN2P52757 468 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 FOLH1Q04609 750 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 EFHC1Q5JVL4 640 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 ANGEL2Q5VTE6 544 aaKnown RBP17.79■□□□□ 0.44
PTPRA-205ENST00000399903 DAW1Q8N136 415 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 BANPQ8N9N5 519 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 RMDN3Q96TC7 470 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 S100A14Q9HCY8 104 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 ZHX2Q9Y6X8 837 aa17.79■□□□□ 0.44
PTPRA-205ENST00000399903 MTMR1Q13613 665 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 BMPR2Q13873 1038 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 C1orf228Q6PIY5 440 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 B3GNT6Q6ZMB0 384 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 PDSS2Q86YH6 399 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 PRPF18Q99633 342 aaKnown RBP17.78■□□□□ 0.44
PTPRA-205ENST00000399903 SIKE1Q9BRV8 207 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 TCEAL9Q9UHQ7 104 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 DENND3A2RUS2 1198 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 ALOX15BO15296 676 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 PROCP04070 461 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 BAATQ14032 418 aaPredicted RBP17.78■□□□□ 0.44
PTPRA-205ENST00000399903 CYLC2Q14093 348 aaPredicted RBP17.78■□□□□ 0.44
PTPRA-205ENST00000399903 KRT72Q14CN4 511 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 SMTNL2Q2TAL5 461 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 TKFCQ3LXA3 575 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 LRRC8BQ6P9F7 803 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 KLHDC10Q6PID8 442 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 TDRPQ86YL5 185 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 GALNT4Q8N4A0 578 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 NCSTNQ92542 709 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 DGCR14Q96DF8 476 aaKnown RBP17.78■□□□□ 0.44
PTPRA-205ENST00000399903 NACC1Q96RE7 527 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 LIN28AQ9H9Z2 209 aaKnown RBP17.78■□□□□ 0.44
PTPRA-205ENST00000399903 BOLA2-SMG1P6H3BVE0 249 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 MAGEC1O60732 1142 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 PROSCO94903 275 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 RAP1GDS1P52306 607 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 MAP3K10Q02779 954 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 LMNB2Q03252 620 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 KLF1Q13351 362 aaPredicted RBP17.78■□□□□ 0.44
PTPRA-205ENST00000399903 CYTH1Q15438 398 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 NADK2Q4G0N4 442 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 SHC3Q92529 594 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 PCDHGB4Q9UN71 923 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 PCDHGB5Q9Y5G0 923 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 PCDHGA4Q9Y5G9 962 aa17.78■□□□□ 0.44
PTPRA-205ENST00000399903 ZNF646O15015 1829 aaPredicted RBP17.77■□□□□ 0.44
PTPRA-205ENST00000399903 F8W8V4 182 aa17.77■□□□□ 0.44
PTPRA-205ENST00000399903 TM9SF1O15321 606 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms