RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 SOCS4Q8WXH5 440 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 CLIP3Q96DZ5 547 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 THUMPD3Q9BV44 507 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 PACSIN1Q9BY11 444 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 NAGPAQ9UK23 515 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 A0A0D9SFI3 127 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 TP73O15350 636 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 ASNA1O43681 348 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 MAGEA10P43363 369 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 ABCE1P61221 599 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 MAPRE2Q15555 327 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 PRR5LQ6MZQ0 368 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 NOTUMQ6P988 496 aa11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 KIAA1324Q6UXG2 1013 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 RBM43Q6ZSC3 357 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 XPO6Q96QU8 1125 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 MORC2Q9Y6X9 1032 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-217ENST00000399641 MYMKA6NI61 221 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 NCAM2O15394 837 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 RTN3O95197 1032 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 SKIV2L2P42285 1042 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 B3GALNT2Q8NCR0 500 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 CATSPER1Q8NEC5 780 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 AGBL3Q8NEM8 1001 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 RBM41Q96IZ5 413 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 DNAJC1Q96KC8 554 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PCMTD2Q9NV79 361 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 ARHGEF38Q9NXL2 777 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 DIS3Q9Y2L1 958 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 METP08581 1390 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PTCH1Q13635 1447 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 ALBP02768 609 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PTPN7P35236 360 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 SLC11A2P49281 568 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 NDUFA8P51970 172 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 TPD52L3Q96J77 140 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 RNF26Q9BY78 433 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 TRIM2Q9C040 744 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 NMRK2Q9NPI5 230 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 RBAKQ9NYW8 714 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 SSNA1O43805 119 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PALMO75781 387 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 TERF2Q15554 542 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PI16Q6UXB8 463 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PID1Q7Z2X4 250 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 CACUL1Q86Y37 369 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 SLC7A14Q8TBB6 771 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 UTP15Q8TED0 518 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 C1orf54Q8WWF1 131 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 RELTQ969Z4 430 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 EAF2Q96CJ1 260 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 MXD3Q9BW11 206 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 GPR63Q9BZJ6 419 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 OSBPL5Q9H0X9 879 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 EHD3Q9NZN3 535 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 KCNN4O15554 427 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 NCK2O43639 380 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 ENDOD1O94919 500 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 OR6B1O95007 311 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 CLTBP09497 229 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 AKR1B1P15121 316 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 NDUFAF6Q330K2 333 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 OTUD7AQ8TE49 926 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 RUBCNQ92622 972 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 LMBRD1Q9NUN5 540 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 TOR4AQ9NXH8 423 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 KIF21AQ7Z4S6 1674 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 CEP170Q5SW79 1584 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 RGSL1A5PLK6 1076 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 ASS1P00966 412 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PSMD7P51665 324 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 KCNK10P57789 538 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 AP1S1P61966 158 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PRKAA1Q13131 559 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 ENKURQ8TC29 256 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PABPC5Q96DU9 382 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 ECSITQ9BQ95 431 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 PHF11Q9UIL8 331 aa11.51□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF862O60290 1169 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 NPY2RP49146 381 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF177Q13360 481 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 RAPSNQ13702 412 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ACAP2Q15057 778 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF671Q8TAW3 534 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 LRRIQ3A6PVS8 624 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF24P17028 368 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 CHRM3P20309 590 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 CSTF3Q12996 717 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ARID5BQ14865 1188 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 DUOXA2Q1HG44 320 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 PACS1Q6VY07 963 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 PARP8Q8N3A8 854 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 PYCARDQ9ULZ3 195 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ABCC12Q96J65 1359 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 NOS1APO75052 506 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 H2AFYO75367 372 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 FGFR1P11362 822 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF23P17027 643 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms