RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 USP3Q9Y6I4 520 aa7.18□□□□□ -1.26
CX3CR1-202ENST00000399220 TTC3P53804 2025 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 ATXN2Q99700 1313 aaKnown RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 MEIS3P2A8K0S8 358 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 E5RJQ4 531 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 F8VP50 259 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 SMAPO00193 183 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TP73O15350 636 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TJP3O95049 919 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 GHRP10912 638 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 KDELR1P24390 212 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 KLRC2P26717 231 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 SCAPQ12770 1279 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 FAM47CQ5HY64 1035 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 INTS6LQ5JSJ4 861 aaKnown RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 CLLU1OSQ5K130 101 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 LLGL2Q6P1M3 1020 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 DCUN1D2Q6PH85 259 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 CLEC20AQ6ZU45 233 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 BHLHA9Q7RTU4 235 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 GPR65Q8IYL9 337 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 RNF168Q8IYW5 571 aaPredicted RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 C12orf29Q8N999 325 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 OR6B3Q8NGW1 331 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 ATL2Q8NHH9 583 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 HERPUD2Q9BSE4 406 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 B3GNT5Q9BYG0 378 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 DDX47Q9H0S4 455 aaKnown RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 ACBD3Q9H3P7 528 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 CNGB3Q9NQW8 809 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 METTL5Q9NRN9 209 aaKnown RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 UTP11Q9Y3A2 253 aaKnown RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 SCN5AQ14524 2016 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 LIASO43766 372 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TBC1D4O60343 1298 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 NBNO60934 754 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 HSF2BPO75031 334 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TKTP29401 623 aaKnown RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 SCNN1GP51170 649 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 SMARCB1Q12824 385 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 DPYSL2Q16555 572 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TIGD5Q53EQ6 642 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 CYP4A22Q5TCH4 519 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 SLC9A4Q6AI14 798 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 CCDC137Q6PK04 289 aaKnown RBP7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 ZDHHC24Q6UX98 284 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 ANKS1BQ7Z6G8 1248 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 ZNF276Q8N554 614 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 BBOF1Q8ND07 529 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 PPP1R13LQ8WUF5 828 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 NTAN1Q96AB6 310 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 ZNF670Q9BS34 389 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TMEM109Q9BVC6 243 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TRIM62Q9BVG3 475 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 AP1M1Q9BXS5 423 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 UNC93B1Q9H1C4 597 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TRPV6Q9H1D0 765 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 EPB41L5Q9HCM4 733 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 TJP2Q9UDY2 1190 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 GINS2Q9Y248 185 aa7.17□□□□□ -1.26
CX3CR1-202ENST00000399220 ENPP3O14638 875 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 ITIH2P19823 946 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 PSMA2P25787 234 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 IL1R2P27930 398 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 MAGEA11P43364 429 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 CARSP49589 748 aaKnown RBP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 ZNF211Q13398 564 aaPredicted RBP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 PIK3R5Q8WYR1 880 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 FUBP3Q96I24 572 aaKnown RBP eCLIP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 CASD1Q96PB1 797 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 NPY6RQ99463 290 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 SYT15Q9BQS2 421 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 ZCWPW1Q9H0M4 648 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 GOLGA2P5Q9HBQ8 144 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 HSFX1Q9UBD0 423 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 CHORDC1Q9UHD1 332 aaPredicted RBP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 AMACRQ9UHK6 382 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 RAD54BQ9Y620 910 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 TCRBV7S2A1N4TA0A589 114 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 FAM92AA1XBS5 289 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 TTI1O43156 1089 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 SHOX2O60902 331 aaPredicted RBP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 SEC31AO94979 1220 aaKnown RBP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 IGLV3-25P01717 112 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 CTSHP09668 335 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 MIPP30301 263 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 MATKP42679 507 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 HCAR3P49019 387 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 MRPS5P82675 430 aaKnown RBP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 GUCY2DQ02846 1103 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 MTMR3Q13615 1198 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 PKN2Q16513 984 aaKnown RBP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 SLC25A52Q3SY17 297 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 NOMO2Q5JPE7 1267 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 OTUD1Q5VV17 481 aaPredicted RBP7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 WSCD1Q658N2 575 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 AADACL2Q6P093 401 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 SLC39A5Q6ZMH5 540 aa7.16□□□□□ -1.26
CX3CR1-202ENST00000399220 CEP128Q6ZU80 1094 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms