RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 UNC13DQ70J99 1090 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 MTSS1LQ765P7 747 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CACTIN-AS1Q8N1I8 211 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 TMEM145Q8NBT3 493 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 ZBTB34Q8NCN2 500 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 LINC00301Q8NCQ3 95 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 FAM156AQ8NDB6 213 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 BVESQ8NE79 360 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CHTF18Q8WVB6 975 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 PRPF31Q8WWY3 499 aaKnown RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 LINC01599Q8WXQ3 324 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 OVCA2Q8WZ82 227 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 TMEM169Q96HH4 297 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 ASB2Q96Q27 587 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 ADAM2Q99965 735 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 TTYH1Q9H313 450 aaPredicted RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CCDC86Q9H6F5 360 aaKnown RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 KMT5AQ9NQR1 393 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 MKS1Q9NXB0 559 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 IGSF9Q9P2J2 1179 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 ITGA11Q9UKX5 1188 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 YBX2Q9Y2T7 364 aaKnown RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 PCDHB2Q9Y5E7 798 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 KIAA0100Q14667 2235 aaKnown RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 A6NCN8 305 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 K7ERI5 159 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 K7ESF4 209 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 SHOXO15266 292 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 SPTLC2O15270 562 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 OGTO15294 1046 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 SLC16A3O15427 465 aaKnown RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 P4HA2O15460 535 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 FOXD2O60548 495 aaPredicted RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 JAK2O60674 1132 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 N4BP1O75113 896 aaKnown RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 OFD1O75665 1012 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 GNA14O95837 355 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 RPN1P04843 607 aaKnown RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 ALDH2P05091 517 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 HSP90AA1P07900 732 aaKnown RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 GHRP10912 638 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 SYN1P17600 705 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 SYT1P21579 422 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CD52P31358 61 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 MCM7P33993 719 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CTNNB1P35222 781 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CCL23P55773 120 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 UGCGQ16739 394 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 EDRF1Q3B7T1 1238 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 USP41Q3LFD5 358 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 UBXN11Q5T124 520 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 ATF7IP2Q5U623 682 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 RRAGBQ5VZM2 374 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 DENND5AQ6IQ26 1287 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 PPP1R2P3Q6NXS1 205 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 TXNDC11Q6PKC3 985 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 SLC41A1Q8IVJ1 513 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 ADHFE1Q8IWW8 467 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 COLGALT2Q8IYK4 626 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CCDC89Q8N998 374 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 BEST2Q8NFU1 509 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CYP2W1Q8TAV3 490 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 SUSD6Q92537 303 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 IGSF21Q96ID5 467 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 SNX27Q96L92 541 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 TCEANC2Q96MN5 208 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 TRIM6Q9C030 488 aaPredicted RBP4.06□□□□□ -1.76
UBE3A-202ENST00000397954 KIF9Q9HAQ2 790 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CHST7Q9NS84 486 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 CD207Q9UJ71 328 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 PLAGL2Q9UPG8 496 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF451Q9Y4E5 1061 aa4.06□□□□□ -1.76
UBE3A-202ENST00000397954 LCHNA4D1U4 455 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 M0QZQ0 153 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 SOX1O00570 391 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ATXN7O15265 892 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 SNX2O60749 519 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ZC3H11AO75152 810 aaKnown RBP eCLIP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 MED24O75448 989 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 KCNH1O95259 989 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 URODP06132 367 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 THP07101 528 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 BMP2P12643 396 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CPA1P15085 419 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CHKAP35790 457 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 GLUD2P49448 558 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 YWHAEP62258 255 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 KCNC4Q03721 635 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF268Q14587 947 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ELF2Q15723 593 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CLUL1Q15846 466 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 TMEM201Q5SNT2 666 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 TWF2Q6IBS0 349 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 UBE2R2Q712K3 238 aaPredicted RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 RHPN2Q8IUC4 686 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ZC3H3Q8IXZ2 948 aaKnown RBP4.05□□□□□ -1.76
UBE3A-202ENST00000397954 CEP57L1Q8IYX8 460 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 METTL13Q8N6R0 699 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 RNF149Q8NC42 400 aa4.05□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF507Q8TCN5 953 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms