RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 DENND5BQ6ZUT9 1274 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 TFAP2DQ7Z6R9 452 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 ZFP42Q96MM3 310 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 SPTLC1O15269 473 aa16.02■□□□□ 0.15
LSS-202ENST00000397728 HSPA4LO95757 839 aa16.02■□□□□ 0.15
LSS-202ENST00000397728 RPL9P32969 192 aaKnown RBP16.02■□□□□ 0.15
LSS-202ENST00000397728 NDUFV1P49821 464 aa16.02■□□□□ 0.15
LSS-202ENST00000397728 DBF4BQ8NFT6 615 aa16.02■□□□□ 0.15
LSS-202ENST00000397728 SCLYQ96I15 445 aa16.02■□□□□ 0.15
LSS-202ENST00000397728 FAM84AQ96KN4 292 aa16.02■□□□□ 0.15
LSS-202ENST00000397728 SLC27A5Q9Y2P5 690 aa16.02■□□□□ 0.15
LSS-202ENST00000397728 MRPL42Q9Y6G3 142 aaKnown RBP16.02■□□□□ 0.15
LSS-202ENST00000397728 NVLO15381 856 aaKnown RBP16.01■□□□□ 0.15
LSS-202ENST00000397728 CCL5P13501 91 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 RCN2Q14257 317 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 ARSHQ5FYA8 562 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 DCLRE1AQ6PJP8 1040 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 IL17RAQ96F46 866 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 GOLGA2P5Q9HBQ8 144 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 OSGEPQ9NPF4 335 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 LATS2Q9NRM7 1088 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 ZC3H7BQ9UGR2 993 aaKnown RBP16.01■□□□□ 0.15
LSS-202ENST00000397728 XPO7Q9UIA9 1087 aaKnown RBP16.01■□□□□ 0.15
LSS-202ENST00000397728 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
LSS-202ENST00000397728 KLRC4O43908 158 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 NCKAP1LP55160 1127 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 SYTL3Q4VX76 610 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 FAXCQ5TGI0 409 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 ALS2CLQ60I27 953 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 DEFB106AQ8N104 65 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 PPFIBP2Q8ND30 876 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 KRT35Q92764 455 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 PTCH2Q9Y6C5 1203 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 LTBP4Q8N2S1 1624 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 PLPP4Q5VZY2 271 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 DDX23Q9BUQ8 820 aaKnown RBP16.01■□□□□ 0.15
LSS-202ENST00000397728 SLC13A1Q9BZW2 595 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 ARHGAP20Q9P2F6 1191 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 MAFBQ9Y5Q3 323 aaPredicted RBP16.01■□□□□ 0.15
LSS-202ENST00000397728 TRIM66O15016 1216 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 PARNO95453 639 aaKnown RBP16.01■□□□□ 0.15
LSS-202ENST00000397728 ACRP10323 421 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 OR1D2P34982 312 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 TMPRSS15P98073 1019 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 C4orf32Q8N8J7 132 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 SERPINB11Q96P15 392 aa16.01■□□□□ 0.15
LSS-202ENST00000397728 CFAP99D6REC4 459 aa16■□□□□ 0.15
LSS-202ENST00000397728 CYP2C18P33260 490 aa16■□□□□ 0.15
LSS-202ENST00000397728 RASSF2P50749 326 aa16■□□□□ 0.15
LSS-202ENST00000397728 MNAT1P51948 309 aa16■□□□□ 0.15
LSS-202ENST00000397728 RHOAP61586 193 aa16■□□□□ 0.15
LSS-202ENST00000397728 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
LSS-202ENST00000397728 UNC93AQ86WB7 457 aa16■□□□□ 0.15
LSS-202ENST00000397728 ZNF296Q8WUU4 475 aaPredicted RBP16■□□□□ 0.15
LSS-202ENST00000397728 RBM15Q96T37 977 aaKnown RBP eCLIP16■□□□□ 0.152e-10■□□□□ 8.4
LSS-202ENST00000397728 ZSWIM1Q9BR11 485 aa16■□□□□ 0.15
LSS-202ENST00000397728 LRRC1Q9BTT6 524 aa16■□□□□ 0.15
LSS-202ENST00000397728 TRAIPQ9BWF2 469 aa16■□□□□ 0.15
LSS-202ENST00000397728 NIFKQ9BYG3 293 aaKnown RBP16■□□□□ 0.15
LSS-202ENST00000397728 ADAM33Q9BZ11 813 aa16■□□□□ 0.15
LSS-202ENST00000397728 ASAH2Q9NR71 780 aa16■□□□□ 0.15
LSS-202ENST00000397728 SPG21Q9NZD8 308 aa16■□□□□ 0.15
LSS-202ENST00000397728 TLL2Q9Y6L7 1015 aa16■□□□□ 0.15
LSS-202ENST00000397728 DUSP10Q9Y6W6 482 aa16■□□□□ 0.15
LSS-202ENST00000397728 E5RJQ4 531 aa16■□□□□ 0.15
LSS-202ENST00000397728 STX7O15400 261 aaKnown RBP16■□□□□ 0.15
LSS-202ENST00000397728 COPS2P61201 443 aa16■□□□□ 0.15
LSS-202ENST00000397728 FASTKD1Q53R41 847 aaKnown RBP16■□□□□ 0.15
LSS-202ENST00000397728 ZNF467Q7Z7K2 595 aaPredicted RBP16■□□□□ 0.15
LSS-202ENST00000397728 TBC1D1Q86TI0 1168 aaPredicted RBP16■□□□□ 0.15
LSS-202ENST00000397728 PTPRN2Q92932 1015 aa16■□□□□ 0.15
LSS-202ENST00000397728 C9orf72Q96LT7 481 aa16■□□□□ 0.15
LSS-202ENST00000397728 EPC1Q9H2F5 836 aa16■□□□□ 0.15
LSS-202ENST00000397728 KCNF1Q9H3M0 494 aa16■□□□□ 0.15
LSS-202ENST00000397728 ALS2Q96Q42 1657 aa16■□□□□ 0.15
LSS-202ENST00000397728 LZTS3O60299 673 aaPredicted RBP16■□□□□ 0.15
LSS-202ENST00000397728 LTFP02788 710 aa16■□□□□ 0.15
LSS-202ENST00000397728 PDK2Q15119 407 aa16■□□□□ 0.15
LSS-202ENST00000397728 NFIL3Q16649 462 aa16■□□□□ 0.15
LSS-202ENST00000397728 HABP4Q5JVS0 413 aaKnown RBP16■□□□□ 0.15
LSS-202ENST00000397728 PKP3Q9Y446 797 aa16■□□□□ 0.15
LSS-202ENST00000397728 F8VP50 259 aa16■□□□□ 0.15
LSS-202ENST00000397728 RALBP11234 206 aa16■□□□□ 0.15
LSS-202ENST00000397728 CLCN6P51797 869 aa16■□□□□ 0.15
LSS-202ENST00000397728 NAPEPLDQ6IQ20 393 aa16■□□□□ 0.15
LSS-202ENST00000397728 BLOC1S5Q8TDH9 187 aa16■□□□□ 0.15
LSS-202ENST00000397728 RNF186Q9NXI6 227 aa16■□□□□ 0.15
LSS-202ENST00000397728 SYF2O95926 243 aaKnown RBP15.99■□□□□ 0.15
LSS-202ENST00000397728 SLC10A3P09131 477 aa15.99■□□□□ 0.15
LSS-202ENST00000397728 OCRLQ01968 901 aa15.99■□□□□ 0.15
LSS-202ENST00000397728 MCOLN2Q8IZK6 566 aa15.99■□□□□ 0.15
LSS-202ENST00000397728 TMA16Q96EY4 203 aaKnown RBP15.99■□□□□ 0.15
LSS-202ENST00000397728 SLC7A5P2Q9GIP4 190 aa15.99■□□□□ 0.15
LSS-202ENST00000397728 IKZF4Q9H2S9 585 aa15.99■□□□□ 0.15
LSS-202ENST00000397728 DHX33Q9H6R0 707 aaKnown RBP15.99■□□□□ 0.15
LSS-202ENST00000397728 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.99■□□□□ 0.15
LSS-202ENST00000397728 MARCH2Q9P0N8 246 aa15.99■□□□□ 0.15
LSS-202ENST00000397728 CASZ1Q86V15 1759 aa15.99■□□□□ 0.15
LSS-202ENST00000397728 ZNF263O14978 683 aa15.99■□□□□ 0.15
LSS-202ENST00000397728 PSTPIP1O43586 416 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms