RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NMD3Q96D46 503 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 MFSD14AQ96MC6 490 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TEPSINQ96N21 525 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 DCLK3Q9C098 648 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 LRRC19Q9H756 370 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TLE6Q9H808 572 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 METTL5Q9NRN9 209 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 STK32BQ9NY57 414 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ZNF711Q9Y462 761 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 KIAA1217Q5T5P2 1943 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 EXOC1LA0A1B0GW35 172 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 FSCN2O14926 492 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 DGAT1O75907 488 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 MUTP22033 750 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 GLRA2P23416 452 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 IVDP26440 423 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 SFNP31947 248 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 SERPINB8P50452 374 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 DRG2P55039 364 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 BACE1P56817 501 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 MYL6P60660 151 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 IGBP1P78318 339 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 IL9RQ01113 521 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 DSG1Q02413 1049 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 DCTN2Q13561 401 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 EFTUD2Q15029 972 aaKnown RBP eCLIP5.25□□□□□ -1.575e-7■■■□□ 16.7
SSR1-202ENST00000397511 LY6KQ17RY6 165 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ANGEL2Q5VTE6 544 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 ZNF772Q68DY9 489 aaPredicted RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 CGB2Q6NT52 195 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 DUS1LQ6P1R4 473 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 B3GNT6Q6ZMB0 384 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 PPP1R21Q6ZMI0 780 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 USP37Q86T82 979 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 NSUN6Q8TEA1 469 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 ZNF606Q8WXB4 792 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 SLC7A3Q8WY07 619 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 NLRP4Q96MN2 994 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TIMMDC1Q9NPL8 285 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TRPV5Q9NQA5 729 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ARHGEF38Q9NXL2 777 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 CHKBQ9Y259 395 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 MKI67P46013 3256 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 A0A1W2PPM1 405 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 F5H423 210 aaPredicted RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 EXTL3O43909 919 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 TBX10O75333 385 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 PEX14O75381 377 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 GRAP2O75791 330 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 C4BPAP04003 597 aaKnown RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 PGK2P07205 417 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 CD48P09326 243 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 HSPA6P17066 643 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ITIH2P19823 946 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 VARSP26640 1264 aaKnown RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 SSTR1P30872 391 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 GMPSP49915 693 aaPredicted RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 HADHBP55084 474 aaKnown RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 PDE1BQ01064 536 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 OGDHQ02218 1023 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 GSTM4Q03013 218 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 NCOA4Q13772 614 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 TTLL12Q14166 644 aaPredicted RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 TAF5Q15542 800 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 CLUL1Q15846 466 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 CDO1Q16878 200 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ZACNQ401N2 412 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 MON1BQ7L1V2 547 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 FAM83AQ86UY5 434 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 RHOT1Q8IXI2 618 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 C12orf56Q8IXR9 622 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 SLC15A3Q8IY34 581 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 DTX3LQ8TDB6 740 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 DIS3LQ8TF46 1054 aaKnown RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 LPAR1Q92633 364 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 MCUR1Q96AQ8 359 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 DGCR14Q96DF8 476 aaKnown RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 SERPINB12Q96P63 405 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 TUBB6Q9BUF5 446 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 NACA2Q9H009 215 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 PFDN4Q9NQP4 134 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ZNF302Q9NR11 478 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 SAR1AQ9NR31 198 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ANKEF1Q9NU02 776 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ZNF180Q9UJW8 692 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ZNF214Q9UL59 606 aaPredicted RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 AGTPBP1Q9UPW5 1226 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 TBC1D30Q9Y2I9 924 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 COQ4Q9Y3A0 265 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 STARD13Q9Y3M8 1113 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 NEU2Q9Y3R4 380 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 MYH9P35579 1960 aaKnown RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 TBC1D12O60347 775 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 CCDC22O60826 627 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 PROSCO94903 275 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ZWINTO95229 277 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 CBX6O95503 412 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 T-ENOLP0DO92 83 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 PORP16435 677 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms