RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 SEC13P55735 322 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 IRX4P78413 519 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 MESP2Q0VG99 397 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 TAF10Q12962 218 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 HSF5Q4G112 596 aaPredicted RBP12.72□□□□□ -0.37
SYNE4-203ENST00000397428 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 TDRD10Q5VZ19 366 aaKnown RBP12.72□□□□□ -0.37
SYNE4-203ENST00000397428 SFTPA1Q8IWL2 248 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 IL17RCQ8NAC3 791 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 MDGA1Q8NFP4 955 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 SNX25Q9H3E2 840 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 TMEM30AQ9NV96 361 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 CHD6Q8TD26 2715 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 PTPRDP23468 1912 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 E2F8A0AVK6 867 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 PATE3B3GLJ2 98 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 EIF3DO15371 548 aaKnown RBP eCLIP12.71□□□□□ -0.37
SYNE4-203ENST00000397428 KAT7O95251 611 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
SYNE4-203ENST00000397428 CEACAM1P13688 526 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 P2RY2P41231 377 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 KIR2DL1P43626 348 aaPredicted RBP12.71□□□□□ -0.37
SYNE4-203ENST00000397428 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
SYNE4-203ENST00000397428 PSMD6Q15008 389 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 E2F4Q16254 413 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 SNRNP35Q16560 246 aaKnown RBP12.71□□□□□ -0.37
SYNE4-203ENST00000397428 MDH1BQ5I0G3 518 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 SNX30Q5VWJ9 437 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 ANO7Q6IWH7 933 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 HS2ST1Q7LGA3 356 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 PHTF2Q8N3S3 785 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 ALLCQ8N6M5 410 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 PDILTQ8N807 584 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 RDH13Q8NBN7 331 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 DUSP9Q99956 384 aaKnown RBP12.71□□□□□ -0.37
SYNE4-203ENST00000397428 TPSD1Q9BZJ3 242 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 TRIM9Q9C026 710 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 GZF1Q9H116 711 aaPredicted RBP12.71□□□□□ -0.37
SYNE4-203ENST00000397428 TNMDQ9H2S6 317 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 IL37Q9NZH6 218 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 TBC1D14Q9P2M4 693 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 MTMR6Q9Y217 621 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 CPQQ9Y646 472 aa12.71□□□□□ -0.37
SYNE4-203ENST00000397428 ABCA7Q8IZY2 2146 aa12.71□□□□□ -0.38
SYNE4-203ENST00000397428 NUP205Q92621 2012 aa12.71□□□□□ -0.38
SYNE4-203ENST00000397428 SGK1O00141 431 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 TNFRSF10BO14763 440 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 ALDH1A2O94788 518 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 ABL1P00519 1130 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 GRIA2P42262 883 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 NASPP49321 788 aaPredicted RBP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 NOVA1P51513 510 aaKnown RBP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 AMPD3Q01432 767 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 CYP24A1Q07973 514 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 WDR72Q3MJ13 1102 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 SH3PXD2AQ5TCZ1 1133 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 CYP2U1Q7Z449 544 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 NUP93Q8N1F7 819 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 KDF1Q8NAX2 398 aaPredicted RBP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 TXNDC5Q8NBS9 432 aaKnown RBP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 OVCA2Q8WZ82 227 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 SLITRK1Q96PX8 696 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 C7orf25Q9BPX7 421 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 ELOVL4Q9GZR5 314 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 XYLT2Q9H1B5 865 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 CUEDC2Q9H467 287 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 DPEP3Q9H4B8 488 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 TMEM9BQ9NQ34 198 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 AGPAT3Q9NRZ7 376 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 SMPD4Q9NXE4 827 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 CFAP97Q9P2B7 532 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 CHORDC1Q9UHD1 332 aaPredicted RBP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 EVLQ9UI08 416 aaPredicted RBP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 THADAQ6YHU6 1953 aa12.7□□□□□ -0.38
SYNE4-203ENST00000397428 CNOT1A5YKK6 2376 aaKnown RBP12.7□□□□□ -0.38
SYNE4-203ENST00000397428 ZZEF1O43149 2961 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 ADAM23O75077 832 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 KLF8O95600 359 aaPredicted RBP12.69□□□□□ -0.38
SYNE4-203ENST00000397428 APODP05090 189 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 TNNI1P19237 187 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 YWHAQP27348 245 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 ATICP31939 592 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 TIE1P35590 1138 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 DHPSP49366 369 aaPredicted RBP12.69□□□□□ -0.38
SYNE4-203ENST00000397428 MYL6P60660 151 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 EHHADHQ08426 723 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 EOGTQ5NDL2 527 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 PAQR9Q6ZVX9 377 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 LPCAT2Q7L5N7 544 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms